| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 58 [0] | [0] 58 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 57 (0.780) | 40/98 | 0.1 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
TTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCAC > NC_000913/549569‑549666 | cgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg > 1:432680‑M2/49‑49 (MQ=255)cgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg < 1:593635‑M2/1‑1 (MQ=255)cgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg < 1:290853‑M2/1‑1 (MQ=255) cgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc > 1:5287413‑M2/46‑50 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcg > 1:4803933‑M2/45‑50 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcg > 1:3527776‑M2/45‑50 (MQ=255) caaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCaa < 1:1408171‑M2/11‑1 (MQ=255) caaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCaa > 1:2700851‑M2/40‑50 (MQ=255) aaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:4908385‑M2/12‑1 (MQ=255) aaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:4280990‑M2/12‑1 (MQ=255) aatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt > 1:1719992‑M2/38‑49 (MQ=255) atgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGa < 1:1957377‑M2/14‑1 (MQ=255) atgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGa < 1:2952981‑M2/14‑1 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 1:2586891‑M2/15‑1 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 1:250488‑M2/15‑1 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 1:2493988‑M2/15‑1 (MQ=255) gcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc > 1:379784‑M2/35‑49 (MQ=255) gcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc > 1:1892552‑M2/35‑49 (MQ=255) gcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc > 1:4548318‑M2/35‑49 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGa > 1:2103241‑M2/34‑50 (MQ=255) ccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatc < 1:700639‑M2/19‑1 (MQ=255) caccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatca < 1:4503423‑M2/20‑1 (MQ=255) accctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcat < 1:2929676‑M2/21‑1 (MQ=255) accctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcat > 1:4305315‑M2/30‑50 (MQ=255) ccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcatc < 1:434471‑M2/22‑1 (MQ=255) ccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcatc > 1:565793‑M2/29‑50 (MQ=255) cctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcatc > 1:1624864‑M2/28‑49 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatcca < 1:4630150‑M2/24‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccatc < 1:4710433‑M2/26‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccatc < 1:1269381‑M2/26‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCatccatcc > 1:585147‑M2/24‑50 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCatccatcc < 1:1871491‑M2/27‑1 (MQ=255) agcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCct > 1:672701‑M2/23‑50 (MQ=255) gcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctc < 1:3431284‑M2/29‑1 (MQ=255) gcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctc < 1:1701226‑M2/29‑1 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctct < 1:5216683‑M2/30‑1 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctct < 1:1458619‑M2/30‑1 (MQ=255) cgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCt > 1:5455747‑M2/18‑50 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCtt < 1:4606217‑M2/34‑1 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCtt > 1:3130571‑M2/17‑50 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCtt < 1:4280795‑M2/34‑1 (MQ=255) catccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTg > 1:4831781‑M2/16‑50 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:3207746‑M2/15‑50 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:1602480‑M2/15‑50 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:732553‑M2/15‑50 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc < 1:3899152‑M2/36‑1 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag < 1:2026207‑M2/39‑1 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 1:1237753‑M2/12‑50 (MQ=255) aatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag < 1:4962306‑M2/42‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 1:3709277‑M2/43‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 1:4648155‑M2/43‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 1:2277636‑M2/43‑1 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGtagtag > 1:3806035‑M2/6‑50 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGtagtag > 1:3045030‑M2/6‑50 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgc < 1:96304‑M2/46‑1 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg < 1:1492133‑M2/47‑1 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCa > 1:2234010‑M2/2‑50 (MQ=255) ggAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCAc > 1:2582110/1‑50 (MQ=255) | TTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCAC > NC_000913/549569‑549666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |