Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423698–3424234	3426808–3424653	420–3111	25 [16]	[16] 20	[rrfD]–rrlD	[rrfD],rrlD

GTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGT  >  NC_000913/3426799‑3426858           |                                                  gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgt            >  1:78938/1‑50 (MQ=35) gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgt            >  1:259411/1‑50 (MQ=35)  tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgtt           <  1:2855256/50‑1 (MQ=38)  tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgtt           >  1:251602/1‑50 (MQ=38)  tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgt            <  1:5566596/49‑1 (MQ=35)    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgt         >  1:856462/1‑50 (MQ=38)    tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttg          <  1:3505032/49‑1 (MQ=38)     cACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt        >  1:1165718/1‑50 (MQ=38)      aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt        >  1:2846894/1‑49 (MQ=38)      aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt        <  1:3775859/49‑1 (MQ=38)       cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt        >  1:1760205/1‑48 (MQ=38)         tCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt    >  1:2023969/1‑50 (MQ=38)         tCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt    >  1:1225500/1‑50 (MQ=38)          cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt    <  1:3903084/49‑1 (MQ=38)          cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgt    <  1:4377513/49‑1 (MQ=38)          cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAg     <  1:1950489/48‑1 (MQ=38)           agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtgt  >  1:4920359/1‑50 (MQ=38)           agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtgt  <  1:841275/50‑1 (MQ=38)           agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtgt  >  1:1028375/1‑50 (MQ=38)           agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtg   <  1:1439130/49‑1 (MQ=38)           |                                                  GTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGT  >  NC_000913/3426799‑3426858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑