| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 66 [0] | [0] 67 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 66 (1.140) | 41/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:1246270/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:515073/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:2039503/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:714791/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:4033973/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:2711246/50‑1 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:3634851/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:3873335/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:3545771/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:3899963/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:1626456/47‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGA < 1:462443/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:2957638/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2221220/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2094147/49‑1 CACAGCAATAAAGAGAGTATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:816645/50‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:3065212/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC < 1:341043/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC < 1:2204243/50‑1 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:298423/50‑1 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:1718660/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:734162/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:293696/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:282689/1‑50 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:64116/50‑1 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:3666531/50‑1 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:592540/1‑50 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:2352963/1‑49 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:1424834/1‑49 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:72736/1‑49 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:2899759/1‑49 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:4197948/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:2646486/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:3632265/49‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:2101736/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:2318380/50‑1 ATATGGGCCGAGTGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:2412022/50‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:2129489/1‑50 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:3999902/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:361233/50‑1 ATGGGCCGAATTAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:3330148/1‑49 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:2250556/50‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:2172795/50‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:1512090/50‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT > 1:1513716/1‑50 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:3818336/50‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:1257646/50‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:923448/50‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:1589641/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:3650679/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:2803961/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:2474016/1‑50 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1273286/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:3130810/1‑49 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:2518306/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:904430/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:2739022/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:3889473/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:1470537/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:3026660/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:2834496/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:3042499/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:132338/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:1027625/50‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG < 1:3053492/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:3907359/1‑48 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |