| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 66 [0] | [0] 67 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 66 (1.140) | 41/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 | gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:1246270‑M2/50‑50 (MQ=255)gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:515073‑M2/50‑50 (MQ=255)gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:2039503‑M2/50‑50 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:714791‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:4033973‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:2711246‑M2/2‑1 (MQ=255) ctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATg > 1:3634851‑M2/48‑50 (MQ=255) tgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg > 1:3873335‑M2/47‑50 (MQ=255) tgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg > 1:3545771‑M2/47‑50 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 1:1626456‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:3899963‑M2/45‑49 (MQ=255) tttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGa < 1:462443‑M2/7‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:2094147‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:2221220‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:2957638‑M2/40‑50 (MQ=255) cacagcaataaagagagtatgggccgaatgaaattcccATGGCGAGTTCt < 1:816645‑M2/12‑1 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt < 1:3065212‑M2/12‑1 (MQ=255) cagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGc < 1:2204243‑M2/14‑1 (MQ=255) cagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGc < 1:341043‑M2/14‑1 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa < 1:298423‑M2/15‑1 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa < 1:1718660‑M2/15‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:293696‑M2/17‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:734162‑M2/17‑1 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa < 1:64116‑M2/18‑1 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 1:282689‑M2/33‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 1:3666531‑M2/20‑1 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:592540‑M2/31‑50 (MQ=255) aaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:72736‑M2/30‑49 (MQ=255) aaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:2899759‑M2/30‑49 (MQ=255) aaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:1424834‑M2/30‑49 (MQ=255) aaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:2352963‑M2/30‑49 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 1:3632265‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa > 1:4197948‑M2/29‑50 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa > 1:2646486‑M2/29‑50 (MQ=255) agagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAt > 1:2101736‑M2/28‑50 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg < 1:2318380‑M2/25‑1 (MQ=255) atatgggccgagtgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt < 1:2412022‑M2/28‑1 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 1:2129489‑M2/23‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 1:3999902‑M2/29‑1 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 1:361233‑M2/29‑1 (MQ=255) atgggccgaattaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:3330148‑M2/21‑49 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:2172795‑M2/34‑1 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:1512090‑M2/34‑1 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:3818336‑M2/34‑1 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat > 1:1513716‑M2/17‑50 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:2250556‑M2/34‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:1589641‑M2/35‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:923448‑M2/35‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:1257646‑M2/35‑1 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:3650679‑M2/15‑50 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:2803961‑M2/15‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:2474016‑M2/14‑50 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:1273286‑M2/39‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTg > 1:3130810‑M2/12‑49 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:2518306‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:904430‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 1:3889473‑M2/41‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 1:2739022‑M2/41‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:1470537‑M2/9‑47 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga < 1:3026660‑M2/43‑1 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga < 1:2834496‑M2/43‑1 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa < 1:132338‑M2/44‑1 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa < 1:3042499‑M2/44‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:1027625‑M2/45‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAag < 1:3053492‑M2/48‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:3907359‑M2/2‑48 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAagag < 1:3753650/50‑1 (MQ=255) | GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |