Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 78 [0] | [0] 78 | [dgcJ] | [dgcJ] |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1872029 | 0 (0.000) | 74 (1.300) | 45/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ |
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 | aGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 1:723696‑M1/50‑1 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat > 1:1104752‑M1/1‑48 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:59357‑M1/1‑46 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:799764‑M1/1‑46 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:910851‑M1/1‑46 (MQ=255) gCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:1958270‑M1/1‑45 (MQ=255) gCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg < 1:956970‑M1/50‑6 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:389183‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:80081‑M1/1‑42 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat > 1:1714677‑M1/1‑41 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:2131414‑M1/1‑40 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:972360‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataa < 1:3992042‑M1/49‑11 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataa < 1:2960757‑M1/49‑11 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:2369881‑M1/1‑39 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:2067726‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:1906356‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag > 1:1654244‑M1/1‑38 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:1278034‑M1/50‑13 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag > 1:1178383‑M1/1‑38 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct < 1:2760391‑M1/50‑15 (MQ=255) ttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttc > 1:2735873‑M1/1‑34 (MQ=255) tATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttc < 1:787832‑M1/49‑17 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:1229264‑M1/49‑18 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:1927305‑M1/49‑18 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccg < 1:3141643‑M1/49‑19 (MQ=255) cTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:2639035‑M1/1‑30 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatg < 1:197224‑M1/48‑22 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatg < 1:491739‑M1/48‑22 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat < 1:173317‑M1/47‑21 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga < 1:1427135‑M1/46‑20 (MQ=255) ttttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagc < 1:4254890‑M1/50‑25 (MQ=255) ttttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagc < 1:1361976‑M1/50‑25 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt > 1:1438750‑M1/1‑24 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt > 1:2789660‑M1/1‑24 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:3245663‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:940977‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:1606733‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:873358‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:2104931‑M1/49‑27 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:1346286‑M1/49‑27 (MQ=255) tcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:4229186‑M1/1‑21 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:1906003‑M1/48‑30 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:3151264‑M1/48‑30 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:1693547‑M1/48‑30 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:3881785‑M1/48‑30 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttt < 1:2090974‑M1/47‑29 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:802449‑M1/50‑33 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:4305468‑M1/50‑33 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:1353101‑M1/50‑33 (MQ=255) ttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg > 1:2459332‑M1/1‑17 (MQ=255) tCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg < 1:869648‑M1/49‑34 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:626777‑M1/1‑14 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:2618830‑M1/1‑14 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:1361512‑M1/1‑14 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:1486133‑M1/50‑38 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:1470407‑M1/1‑13 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:442745‑M1/50‑38 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:4119097‑M1/50‑38 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:2660089‑M1/1‑12 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:2678744‑M1/1‑12 (MQ=255) aaCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:2991549‑M1/1‑11 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:3805724‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat < 1:4008361‑M1/48‑39 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat < 1:985956‑M1/48‑39 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:1945967‑M1/1‑8 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:2817448‑M1/1‑8 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:1849272‑M1/1‑7 (MQ=255) aaGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:3246757‑M1/1‑6 (MQ=255) aaGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:1953574‑M1/1‑6 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:4175225‑M1/50‑46 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:2995515‑M1/50‑46 (MQ=255) gagatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaac < 1:3399624‑M1/50‑48 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca < 1:452541‑M1/50‑49 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca < 1:1931957‑M1/50‑49 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:4162328‑M1/1‑1 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:1552347‑M1/1‑1 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:273292‑M1/1‑1 (MQ=255) | AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |