| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 50 (0.720) +CGAGAT |
29/86 | 0.4 | 70.0% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 49 (0.620) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAG > NC_000913/4070444‑4070482 |||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC < 1:1660732/50‑1AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:3764610/1‑50AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:5479477/1‑50 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:5611494/1‑48 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:2525241/1‑48 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:1241244/50‑1 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:5196579/1‑47 AATCAGAATTTCCAGGTCAGTCGGGCTGCAAGTTGCAGACCGTTAC > 1:4485230/1‑46 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT > 1:5269158/1‑50 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT > 1:3146528/1‑50 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:3770927/1‑49 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:1027402/1‑50 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:2157290/1‑50 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:3332222/1‑50 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:96968/1‑50 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC < 1:2273977/50‑1 AATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACG > 1:4980224/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT > 1:4137148/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT < 1:4716970/50‑1 TTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC > 1:1948829/1‑50 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC > 1:2102950/1‑50 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC > 1:3888399/1‑50 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC < 1:5250687/49‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC < 1:4992474/49‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC < 1:4490221/49‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:1589125/1‑50 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT < 1:2187263/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC > 1:4494591/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:5261671/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC > 1:932491/1‑50 GTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCG > 1:2868597/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 1:2895984/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 1:5040287/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 1:4580154/1‑50 GACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCC > 1:1865954/1‑50 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc < 1:4685526/50‑2 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc < 1:531210/50‑2 CGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCct < 1:4295636/50‑3 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:4898934/50‑1 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG < 1:5491681/50‑1 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG > 1:4804067/1‑50 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG > 1:3523766/1‑50 GCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGG > 1:2176446/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:495453/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:3943108/1‑50 CAAGTTGCAGTCAGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAG < 1:5417306/50‑1 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:610060/1‑48 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:4162667/1‑48 TGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 1:4390809/1‑50 GCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT < 1:2947852/49‑1 GCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT < 1:994598/49‑1 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG > 1:4077113/1‑50 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG > 1:3189415/1‑50 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG < 1:5976833/50‑1 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG < 1:3917618/50‑1 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG < 1:3730890/50‑1 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG < 1:5509616/50‑1 CCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:2492137/50‑2 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGtg < 1:2169019/50‑3 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:3383385/1‑48 |||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAG > NC_000913/4070444‑4070482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |