| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 99 [0] | [0] 103 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 97 (1.220) | 58/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:4117774/1‑50 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:607515/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG < 1:5561947/49‑1 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:2531409/1‑50 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA < 1:3265384/50‑1 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAA < 1:3164244/49‑1 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAA < 1:4765125/49‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACA < 1:2365165/50‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:690242/1‑48 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:5602351/50‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:4074476/50‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:824362/1‑50 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:2333281/50‑1 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:966959/50‑1 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:3691649/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:4637170/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:3951086/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:68215/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:2819185/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:259467/49‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:4051773/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:5373747/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:4590219/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:2960880/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT < 1:3832652/49‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:4132775/50‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:2708023/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:139235/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:1952861/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:882807/50‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:3300461/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:5655957/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:958611/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:4441418/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:4814993/50‑1 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGG > 1:5210765/1‑50 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:945405/1‑50 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT < 1:4866104/50‑1 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:4364316/1‑50 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT < 1:4054328/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG < 1:4976424/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:4024895/1‑49 ATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2949995/1‑49 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:2778294/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:2012286/49‑1 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:3898660/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:71732/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2367629/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2588991/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:773561/1‑50 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:912494/1‑49 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:96727/1‑49 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:3950447/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:4889459/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:5971863/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:4504012/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:3604412/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:2893648/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:1943687/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:2470916/50‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:5729572/50‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:5283679/50‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:5382417/50‑1 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:777063/1‑50 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:1535538/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:1789120/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:2781596/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:5352933/49‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC < 1:3480517/50‑1 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:5775504/49‑1 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:3963174/1‑49 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:3168257/1‑49 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:1774099/1‑49 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:2025377/1‑50 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:5374903/50‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:2396841/50‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:583328/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:6034130/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:936894/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT > 1:2676644/1‑50 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG > 1:5273649/1‑50 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC < 1:5315352/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC > 1:1479608/1‑50 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC < 1:4732070/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:1286357/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:4440564/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:1294070/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:4933227/1‑50 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:3875442/1‑50 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGACTTGCCCA > 1:3957117/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:4796532/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:3457384/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:2256150/50‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:1487574/50‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > 1:5771989/1‑50 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:5603422/50‑1 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG < 1:1381313/50‑1 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |