| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 170 [0] | [0] 169 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 167 (2.100) | 70/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 167 total aligned reads displayed.
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2964892/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2148339/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:3996553/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:3052283/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2854330/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:3034246/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:5679360/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT < 1:2712616/50‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:2528105/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:1860800/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:4516651/48‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:6038794/47‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:4880530/47‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:4045709/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:5819688/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2249850/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:3007151/49‑1 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:1034654/1‑49 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:124802/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:707931/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:4408072/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:603645/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4320334/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4147362/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:4842010/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:401490/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:3957155/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:1745004/47‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:2455017/46‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:5753101/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4998415/1‑49 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:1442677/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:3524205/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:200838/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4841605/1‑48 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:937197/1‑48 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:1058295/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:5368806/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:3502764/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:607221/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:2725521/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:2134408/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:2613607/50‑1 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:2933433/1‑49 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:2205002/49‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:1363956/49‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:1669020/49‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:5734179/1‑48 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:43880/50‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:1600363/49‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:3154067/1‑50 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:5653094/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:4804097/1‑50 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:3915492/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:5053033/1‑50 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 1:4716761/1‑50 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG < 1:4948467/50‑1 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:4590024/1‑50 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG < 1:6026194/50‑1 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:401988/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:3680885/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:584546/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:2955426/1‑50 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:892190/1‑50 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC > 1:3339082/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 1:3584109/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC < 1:5674274/49‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 1:4582487/48‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 1:3941344/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCGGGTGGGGCTTTT > 1:1430269/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT > 1:1595590/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:2519349/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 1:3516254/48‑1 GTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:1312766/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:3462505/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:1611995/50‑1 TTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTC > 1:2647637/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG > 1:3829493/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:53291/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:2852122/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC < 1:3123189/50‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG < 1:3626473/49‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG < 1:2761499/49‑1 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC < 1:730444/50‑1 ACGAGTATACCTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:558369/50‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:5402833/50‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:232301/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:1904963/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:3591063/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:2388870/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:4237709/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:1929682/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC > 1:3386569/1‑50 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:3169974/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 1:1304967/1‑50 GTATAACCTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 1:2062632/1‑50 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 1:4642118/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 1:3244985/50‑1 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG < 1:4654737/50‑1 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCCGCCTTTCGGTG < 1:1800989/50‑1 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |