| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 59 [0] | [0] 60 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 56 (1.140) | 45/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:1014528/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:577475/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:1459886/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:186367/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:1827057/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:176229/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:1033014/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:3724549/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:46555/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG > 1:1845428/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:3663729/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:2836324/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1063291/1‑50 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:2753503/1‑49 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:2447206/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:296186/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:1992147/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:3096076/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:1864597/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:2096080/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:1841649/50‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:802594/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:2567851/49‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTATACACTTACT < 1:803314/49‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:3406233/50‑1 TTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT > 1:1940783/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:1964273/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:1968164/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:1987762/50‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:1170364/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:2725170/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:2250915/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:2174887/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:430629/49‑1 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC < 1:326110/50‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:1788159/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:1551875/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:1846717/50‑1 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:1535726/1‑50 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:1945729/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:3181309/1‑48 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 1:1994716/50‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 1:1058687/50‑1 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:1290607/1‑50 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 1:3483223/49‑1 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG < 1:704167/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:1375775/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:2748647/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:3899367/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:139843/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:1544185/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:2615846/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:607303/1‑50 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:19046/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA < 1:2766673/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:3598226/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:2487008/50‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:9014/1‑50 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:1030512/1‑50 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA < 1:2704398/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA < 1:2477384/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA < 1:947937/49‑1 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |