| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 59 [0] | [0] 60 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 56 (1.140) | 45/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:1033014‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:186367‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:1827057‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:176229‑M2/1‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:46555‑M2/2‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:3724549‑M2/2‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg > 1:1845428‑M2/49‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:3663729‑M2/47‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:1063291‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 1:2836324‑M2/6‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:2753503‑M2/44‑49 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:2447206‑M2/8‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:3096076‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa > 1:296186‑M2/39‑50 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:1992147‑M2/12‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 1:1841649‑M2/13‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 1:2096080‑M2/38‑50 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 1:1864597‑M2/38‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:802594‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt < 1:2567851‑M2/14‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTATACACTTACt < 1:803314‑M2/14‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:3406233‑M2/16‑1 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:1940783‑M2/34‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:1964273‑M2/17‑1 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1968164‑M2/32‑49 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 1:1987762‑M2/22‑1 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:1170364‑M2/28‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:2725170‑M2/27‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:2174887‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:2250915‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:430629‑M2/24‑1 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc < 1:326110‑M2/26‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:1551875‑M2/27‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:1788159‑M2/27‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 1:1846717‑M2/29‑1 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:1535726‑M2/21‑50 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:3181309‑M2/19‑48 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:1945729‑M2/32‑1 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg < 1:1058687‑M2/33‑1 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg < 1:1994716‑M2/33‑1 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCa < 1:3483223‑M2/35‑1 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:1290607‑M2/15‑50 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg < 1:704167‑M2/36‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 1:1375775‑M2/37‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:2748647‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:3899367‑M2/39‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 1:2615846‑M2/40‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 1:1544185‑M2/40‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:607303‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:139843‑M2/11‑50 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:19046‑M2/41‑1 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa < 1:2766673‑M2/43‑1 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGa < 1:3598226‑M2/42‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt < 1:2487008‑M2/44‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:9014‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:1030512‑M2/6‑50 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:2477384‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:2704398‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:947937‑M2/47‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:3913303/50‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |