| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 55 (1.070) | 40/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:369504/1‑49AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:476670/1‑49 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:323004/1‑47 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:3402683/1‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:2497138/1‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:2090208/1‑49 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:94869/50‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:1680129/50‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:3882197/48‑1 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:41607/1‑50 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:1176208/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:548745/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:791371/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:2941930/1‑49 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT > 1:2621097/1‑49 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:3841340/50‑1 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:2818070/50‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:3492386/1‑50 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:1397653/1‑49 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:3001279/1‑48 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:2007729/49‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:2144063/1‑46 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:3196709/49‑1 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:2792538/1‑49 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:2531976/1‑49 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:992766/1‑48 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:3138129/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:2689423/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:3880307/50‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC > 1:3076766/1‑50 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG < 1:3505594/49‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG < 1:464450/49‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1376227/1‑50 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:1202351/50‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:681775/49‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:543211/50‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:2739702/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:1951385/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:1604166/50‑1 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:550354/1‑50 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:3462876/1‑50 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC < 1:3888289/50‑1 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:3953390/1‑50 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:3784643/49‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATC < 1:954951/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT > 1:1341669/1‑50 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:1473885/50‑1 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG > 1:3012788/1‑50 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT > 1:2380010/1‑50 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:2626188/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:1643135/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:2428908/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:3029572/50‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > 1:413508/1‑50 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG < 1:579317/49‑1 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |