| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 55 (1.070) | 40/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 | agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:369504‑M2/49‑49 (MQ=255)agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:476670‑M2/49‑49 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:323004‑M2/47‑47 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:2497138‑M2/45‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:3402683‑M2/45‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:2090208‑M2/45‑49 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:3882197‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:94869‑M2/8‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:1680129‑M2/8‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:41607‑M2/40‑50 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:1176208‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:548745‑M2/11‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:2941930‑M2/38‑49 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:791371‑M2/38‑49 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt > 1:2621097‑M2/37‑49 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:2818070‑M2/15‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:3841340‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3492386‑M2/35‑50 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1397653‑M2/34‑49 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3001279‑M2/33‑48 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:2144063‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:2007729‑M2/19‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:3196709‑M2/23‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2531976‑M2/26‑49 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2792538‑M2/26‑49 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:992766‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:3138129‑M2/27‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:2689423‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:3880307‑M2/28‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:3076766‑M2/21‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:3505594‑M2/29‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:464450‑M2/29‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1376227‑M2/20‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:681775‑M2/31‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:1202351‑M2/32‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:2739702‑M2/34‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:543211‑M2/34‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:1604166‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:1951385‑M2/35‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:3462876‑M2/15‑50 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:550354‑M2/15‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc < 1:3888289‑M2/37‑1 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3953390‑M2/13‑50 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:3784643‑M2/39‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:954951‑M2/42‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:1473885‑M2/43‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:1341669‑M2/8‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:3012788‑M2/7‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:2380010‑M2/6‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:2626188‑M2/45‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:1643135‑M2/46‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:2428908‑M2/46‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:3029572‑M2/46‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:579317‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:413508‑M2/2‑50 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:3391964/1‑49 (MQ=255) | GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |