| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 52 [0] | [0] 52 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 52 (1.010) | 42/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165103‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:2366535/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:664793/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC > 1:1457136/1‑50 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 1:2676475/1‑50 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:2697899/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT < 1:883674/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT > 1:2222338/1‑50 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT < 1:680348/50‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:1655703/50‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:3285761/1‑50 CATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:1519242/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:2183003/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:1641416/49‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:1822213/48‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:832782/50‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:270043/50‑1 TTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:2938364/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:168958/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:2597160/1‑49 TAAACGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:3745869/48‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:2178684/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:725098/1‑49 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:2859425/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:3462513/50‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:1119060/50‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:945769/1‑49 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:694248/1‑50 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:3219436/1‑50 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:1472527/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:3389478/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:1954039/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:1165690/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:2740342/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:1506332/1‑49 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:1872082/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:1889501/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:2842233/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:2035648/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3956868/49‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:831316/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 1:2920656/1‑49 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:2557562/1‑50 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA < 1:1998527/50‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:3031557/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:2028266/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:2325471/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:3685913/50‑1 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:1714415/1‑50 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:2329368/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:652085/1‑50 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:2190053/50‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:1946093/50‑1 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165103‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |