| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 26 (0.660) +CGAGATGGACG |
23/76 | 0.2 | 56.0% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 53 (1.030) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg < 1:838008‑M2/1‑1 (MQ=255)atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg < 1:216859‑M2/1‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:2203390/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:1762275/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:2443647/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:1091144/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc < 1:1423934/49‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcc < 1:2073064‑M2/4‑1 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:2752049/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:1341552/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc < 1:736671/49‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcccc < 1:2885137‑M2/6‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt > 1:925608‑M2/44‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt > 1:222645‑M2/44‑50 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 1:3445382/1‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:1355543‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 1:3791688/1‑50 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg < 1:1939435‑M2/9‑1 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg > 1:150546/1‑50 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg > 1:2945872/1‑50 (MQ=255) gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGc > 1:1880963/1‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:2130769‑M2/39‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGcccc > 1:3023207‑M2/38‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt < 1:265130/50‑1 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt < 1:2019874/50‑1 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct > 1:1788088‑M2/36‑48 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 1:3559808/1‑50 (MQ=255) gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTg < 1:127225/50‑1 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:3127635/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2454732/1‑50 (MQ=255) ctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:3177555‑M2/32‑50 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1024357/1‑49 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2148142/1‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:18219/1‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1997995/1‑48 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTgggg < 1:1725616‑M2/20‑1 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:3630949‑M2/29‑47 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga < 1:3230867‑M2/21‑1 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1619704/1‑47 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgag < 1:866792/50‑1 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:74448‑M2/28‑48 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:2816291/1‑50 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:1100528/1‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag > 1:910787‑M2/27‑50 (MQ=255) ttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAggg < 1:3130230‑M2/26‑1 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg < 1:2390503/50‑1 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:216033/1‑50 (MQ=255) gcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:641820‑M2/23‑49 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:3251438‑M2/29‑1 (MQ=255) ttCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg < 1:820074/50‑1 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg > 1:3150214‑M2/21‑50 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:1138332/1‑50 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:1144054/1‑50 (MQ=255) cGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg > 1:3908588/1‑50 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg > 1:1157006‑M2/19‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:1153448/49‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:2506161/49‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:1767979/1‑50 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:1929626‑M2/33‑1 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1689742‑M2/17‑49 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTg < 1:1831861‑M2/34‑1 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:896410‑M2/35‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:3387809/1‑48 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:3080360/1‑48 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:2463529/1‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg < 1:498947/50‑1 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg < 1:841663/50‑1 (MQ=255) gcgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgggg < 1:2169100/50‑1 (MQ=255) gcgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg > 1:1716741/1‑49 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:2003338/1‑50 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:631933/1‑50 (MQ=255) cacaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:2897392/1‑49 (MQ=255) cacaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAc < 1:182518/50‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:717078/1‑48 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:3087546/1‑48 (MQ=255) caATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcag < 1:1804044/50‑1 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:3354024/1‑50 (MQ=255) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:642258/1‑50 (MQ=255) cGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:3504614/1‑49 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:3166568/1‑50 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |