| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 73 [0] | [0] 73 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 73 (1.260) | 52/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675504‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:2722168/50‑1TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:1048379/50‑1TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:1319829/50‑1 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:4452470/1‑50 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:2943300/1‑50 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:2751227/1‑50 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTACCATG > 1:3244090/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:3871531/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCG < 1:3930883/50‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCG < 1:3194956/50‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:523566/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:238227/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:1569259/47‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:1407599/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:3577890/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:3649049/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:2307443/50‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:3511593/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:4335157/50‑1 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:2547073/50‑1 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:125982/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3371935/1‑49 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:1736296/1‑49 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA > 1:1297429/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:617568/1‑50 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:147107/1‑49 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:2962362/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:2533691/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:351016/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:3295360/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:2080585/1‑50 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:3565970/1‑50 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:413628/1‑50 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:3453645/1‑49 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:1552641/49‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:3957534/50‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:86573/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:838183/50‑1 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:840566/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:2833256/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:2553518/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:2585465/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:3341345/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:3446172/1‑50 ATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:3647286/1‑49 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:3759602/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:335147/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGATCTGCATTATCCATTGCATTTA > 1:3111065/1‑50 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:1881022/1‑49 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:1474004/1‑50 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:4184156/49‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:4314044/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:2667735/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:1720949/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:3659290/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:523528/1‑50 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:284438/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:3927005/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:3332115/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1405176/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:4245540/50‑1 GAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:1669853/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:2630737/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:1351017/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:2598446/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:1889170/49‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA > 1:2635927/1‑49 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:566481/50‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:1703294/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG < 1:4403268/50‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:2215805/1‑47 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:2184086/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:1920811/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675504‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |