| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 73 [0] | [0] 73 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 73 (1.260) | 52/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675504‑675600 | tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:2722168‑M1/50‑3 (MQ=255)tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:1048379‑M1/50‑3 (MQ=255)tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:1319829‑M1/50‑3 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:4452470‑M1/1‑47 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:2943300‑M1/1‑47 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:2751227‑M1/1‑47 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTACCatg > 1:3244090‑M1/1‑47 (MQ=255) tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg > 1:3871531‑M1/1‑46 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcg < 1:3930883‑M1/50‑7 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcg < 1:3194956‑M1/50‑7 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc < 1:523566‑M1/49‑6 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:238227‑M1/1‑44 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg < 1:1569259‑M1/47‑4 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc < 1:1407599‑M1/50‑12 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 1:3577890‑M1/1‑39 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 1:3649049‑M1/1‑38 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:2307443‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 1:3511593‑M1/1‑38 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:4335157‑M1/50‑13 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg < 1:2547073‑M1/50‑14 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg < 1:125982‑M1/50‑14 (MQ=255) caGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg > 1:3371935‑M1/1‑36 (MQ=255) caGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg > 1:1736296‑M1/1‑36 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca > 1:1297429‑M1/1‑35 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat > 1:617568‑M1/1‑34 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat > 1:147107‑M1/1‑33 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatta < 1:2962362‑M1/50‑19 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatta > 1:2533691‑M1/1‑32 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat < 1:351016‑M1/50‑20 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat > 1:3295360‑M1/1‑31 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat > 1:2080585‑M1/1‑31 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc > 1:3565970‑M1/1‑30 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc > 1:413628‑M1/1‑30 (MQ=255) aaaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc > 1:3453645‑M1/1‑29 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcc < 1:1552641‑M1/49‑22 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat < 1:3957534‑M1/50‑24 (MQ=255) gagaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccatt < 1:86573‑M1/50‑25 (MQ=255) agaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattg < 1:838183‑M1/50‑26 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca > 1:840566‑M1/1‑23 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat > 1:2833256‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat < 1:2553518‑M1/50‑29 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 1:2585465‑M1/50‑30 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 1:3341345‑M1/50‑30 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt > 1:3446172‑M1/1‑21 (MQ=255) atGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt > 1:3647286‑M1/1‑20 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 1:3759602‑M1/1‑19 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 1:335147‑M1/1‑19 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagatctgcattatccattgcattta > 1:3111065‑M1/1‑19 (MQ=255) gggCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 1:1881022‑M1/1‑18 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttata > 1:1474004‑M1/1‑17 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttat < 1:4184156‑M1/49‑33 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatc < 1:4314044‑M1/50‑36 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatct > 1:2667735‑M1/1‑14 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 1:1720949‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:3659290‑M1/1‑13 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:523528‑M1/1‑13 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttg < 1:284438‑M1/50‑39 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:3927005‑M1/1‑12 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 1:3332115‑M1/50‑40 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 1:1405176‑M1/50‑40 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 1:4245540‑M1/50‑40 (MQ=255) gAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:1669853‑M1/1‑9 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag < 1:2630737‑M1/50‑43 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag < 1:1351017‑M1/50‑43 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag < 1:2598446‑M1/50‑43 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaa < 1:1889170‑M1/49‑42 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaaga > 1:2635927‑M1/1‑6 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 1:566481‑M1/50‑46 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:1703294‑M1/1‑3 (MQ=255) ccatggcgagttctgcattatccattgcatttatatcttgaaagaaaaag < 1:4403268‑M1/50‑49 (MQ=255) ccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:2215805‑M1/1‑2 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaaga < 1:2184086‑M1/50‑50 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaaga < 1:1920811‑M1/50‑50 (MQ=255) | TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675504‑675600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |