| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 75 [0] | [0] 72 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 72 (1.240) | 45/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:3412611/1‑50TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:2002240/1‑50TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:1787808/1‑50 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:2408370/1‑49 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:2039287/1‑49 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:3798917/1‑49 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:1543817/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG < 1:3312522/49‑1 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG < 1:2070525/49‑1 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:747445/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:1738213/48‑1 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA > 1:2302143/1‑49 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:4036284/1‑49 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:3218430/1‑49 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:2474200/1‑48 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:379750/1‑48 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:1123237/50‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG > 1:3758994/1‑50 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:953434/1‑50 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:2036567/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:2489900/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:1287390/49‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:644869/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:4013338/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:3628627/1‑50 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGG < 1:583058/50‑1 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:133511/1‑50 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:2615619/1‑50 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:2370432/1‑50 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAA < 1:1453707/50‑1 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3067308/1‑48 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:4313552/1‑48 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:463088/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2917753/1‑46 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3676467/1‑46 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2033741/1‑46 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:1076027/1‑50 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT < 1:768850/49‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:3086995/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:2754231/49‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT < 1:284052/50‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:1794841/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:2367458/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:3287836/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:2401966/1‑50 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:2795150/1‑50 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:856098/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:2501859/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC < 1:514620/49‑1 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:3065183/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:2641440/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:1744484/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:1462964/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:2649901/49‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:677412/49‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:1303264/49‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC < 1:830953/50‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC > 1:1983738/1‑50 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC > 1:1229281/1‑50 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:2540889/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:1073709/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:466213/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:2197437/1‑50 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:4363619/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:550845/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC < 1:493626/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC > 1:717732/1‑50 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:2626138/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:725673/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:1214848/1‑50 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:1802813/50‑1 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG < 1:2695779/50‑1 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |