| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 75 [0] | [0] 72 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 72 (1.240) | 45/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:3293739/1‑50 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:3616542/50‑1 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:2470203/1‑50 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:3412611‑M1/1‑49 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:2002240‑M1/1‑49 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:1787808‑M1/1‑49 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:2039287‑M1/1‑48 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:1543817‑M1/1‑48 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:3798917‑M1/1‑48 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:2408370‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg < 1:2070525‑M1/49‑3 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:747445‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg < 1:3312522‑M1/49‑3 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:1738213‑M1/48‑2 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:2302143‑M1/1‑46 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:4036284‑M1/1‑44 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:3218430‑M1/1‑44 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:2474200‑M1/1‑43 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:379750‑M1/1‑43 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:3758994‑M1/1‑42 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:1123237‑M1/50‑9 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:953434‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:2036567‑M1/1‑41 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:2489900‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:1287390‑M1/49‑12 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:4013338‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:644869‑M1/50‑15 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg > 1:3628627‑M1/1‑34 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:583058‑M1/50‑18 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:133511‑M1/1‑32 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:2615619‑M1/1‑32 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:2370432‑M1/1‑31 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:1453707‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:3067308‑M1/1‑28 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:4313552‑M1/1‑28 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:463088‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:2917753‑M1/1‑26 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:3676467‑M1/1‑26 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:2033741‑M1/1‑26 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:1076027‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:768850‑M1/49‑26 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:3086995‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta < 1:2754231‑M1/49‑28 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt < 1:284052‑M1/50‑30 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:3287836‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:1794841‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:2367458‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:2401966‑M1/1‑21 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:2795150‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:856098‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct > 1:2501859‑M1/1‑19 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:514620‑M1/49‑31 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:3065183‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:2641440‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:1744484‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:1462964‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:2649901‑M1/49‑33 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:677412‑M1/49‑33 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:1303264‑M1/49‑33 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:1983738‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:830953‑M1/50‑35 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:1229281‑M1/1‑16 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:2540889‑M1/1‑12 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:1073709‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:466213‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:2197437‑M1/1‑11 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:4363619‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:550845‑M1/50‑42 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 1:493626‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:717732‑M1/1‑7 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccc < 1:2626138‑M1/50‑46 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 1:725673‑M1/1‑3 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 1:1214848‑M1/1‑3 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:1802813‑M1/50‑49 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:2695779‑M1/50‑50 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |