| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 73 [0] | [0] 69 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 69 (1.240) | 47/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > NC_000913/2998869‑2998913 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC < 1:727959/50‑1 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:3681606/50‑1 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:3028712/50‑1 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:1395329/50‑1 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:796083/50‑1 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:3862505/1‑49 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:243038/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:736567/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:4121737/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:4242531/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:2386764/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:1893558/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:3548939/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:552131/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC < 1:2613392/49‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC < 1:1168242/49‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:4186093/48‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA > 1:3058884/1‑50 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:1039788/50‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:2002378/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:18261/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:2928188/1‑50 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC < 1:3312705/50‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:245916/1‑49 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA < 1:3520690/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:4149002/1‑49 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA > 1:150163/1‑50 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 1:332128/50‑1 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:4111019/50‑1 CCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG > 1:1208175/1‑49 CCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG > 1:2126118/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:1814158/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:1567659/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA < 1:12431/49‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:138217/1‑49 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:3813158/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:1638745/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:2139486/50‑1 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 1:2760458/50‑1 TATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA > 1:676164/1‑49 ATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:3944132/1‑49 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:2762807/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:620003/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:3560773/1‑48 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT < 1:185573/48‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT < 1:39118/48‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGG < 1:3179864/50‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 1:1619007/1‑50 TTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG > 1:2353010/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:1920846/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:3765216/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:1628673/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:3135980/49‑1 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG < 1:4099489/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:968290/1‑50 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT < 1:2613806/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:366774/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:4027807/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:2088096/49‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 1:2934153/50‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 1:4397474/50‑1 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 1:4314270/1‑50 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 1:4180396/1‑50 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 1:1956082/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:3086352/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:3871232/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:2759739/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:2608580/39‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:1937765/1‑50 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:1972119/1‑50 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:1831735/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:2512801/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT < 1:2227042/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:3009301/1‑49 AGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:3732596/1‑50 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > NC_000913/2998869‑2998913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |