| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 55 [0] | [0] 54 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 54 (0.930) | 37/98 | 0.1 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 | ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat > 1:772198/1‑50 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:3825831‑M1/1‑49 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:3024453‑M1/1‑49 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:2451644‑M1/1‑49 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:1120686‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:465658‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:2170637‑M1/1‑48 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:3973495‑M1/1‑47 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:1914293‑M1/50‑4 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:2620785‑M1/1‑47 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:2744322‑M1/1‑42 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:1364112‑M1/1‑42 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:2921524‑M1/1‑41 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:4069957‑M1/1‑41 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:3635168‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:3841519‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:3885451‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:1499785‑M1/49‑12 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg < 1:2697959‑M1/49‑13 (MQ=255) ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:247133‑M1/1‑35 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:4335620‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:3210892‑M1/1‑34 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:4332453‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:902871‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:4120943‑M1/1‑33 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:2425612‑M1/50‑19 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:2100561‑M1/1‑32 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacat < 1:1158547‑M1/49‑21 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:516766‑M1/1‑28 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca < 1:2116‑M1/50‑24 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcac < 1:3074831‑M1/50‑25 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca > 1:436055‑M1/1‑25 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat < 1:4252600‑M1/50‑30 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt < 1:3503851‑M1/50‑31 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt > 1:394595‑M1/1‑20 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt < 1:4267217‑M1/50‑32 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc < 1:3994284‑M1/49‑33 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:4430361‑M1/1‑16 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta > 1:3429603‑M1/1‑15 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:1117240‑M1/50‑36 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:925026‑M1/50‑36 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac > 1:1535140‑M1/1‑14 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 1:1984754‑M1/50‑38 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc < 1:3346928‑M1/49‑39 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:687959‑M1/50‑41 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg < 1:338282‑M1/50‑42 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg < 1:2177980‑M1/50‑42 (MQ=255) tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg > 1:3163931‑M1/1‑8 (MQ=255) tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg > 1:2553606‑M1/1‑8 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat < 1:2076893‑M1/50‑45 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat < 1:1267725‑M1/50‑45 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt < 1:649241‑M1/50‑46 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:976461‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:557146‑M1/1‑2 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag < 1:3993846‑M1/50‑50 (MQ=255) | ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |