| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 101 [0] | [0] 104 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 87 (0.920) | 52/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 126 total aligned reads displayed.
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:7493529/1‑50CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:4461123/50‑1CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:838599/1‑50CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:757383/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:7916509/1‑49 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:3614739/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:1805078/1‑49 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 1:5156641/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 1:1370329/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:3651972/1‑48 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:2255930/1‑48 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG < 1:1180907/50‑1 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG > 1:3165650/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:8452912/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:6212634/1‑50 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:5400331/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:8222588/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:6938624/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:6256361/1‑49 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 1:1752507/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:4959791/1‑49 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA < 1:2041953/50‑1 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:4104373/1‑48 GATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG > 1:3272454/1‑50 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:1399268/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:737676/1‑50 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:1234405/50‑1 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:7405049/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:4664746/49‑1 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:3600733/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:7377849/49‑1 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:5969443/1‑49 ATCAAAAAATTTACCGCACTAGGCTCGCATATTCGTGAAGGCAAGTGCA > 1:5832589/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:3188277/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:8224324/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGAAA < 1:8458592/50‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG < 1:6386085/50‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:2988961/1‑47 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:3424002/50‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:1519927/50‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:8453219/50‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:5640054/50‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:2788623/50‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA > 1:6844/1‑49 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA > 1:1272037/1‑50 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA > 1:6797949/1‑50 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT > 1:4256092/1‑50 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:4311129/50‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAT > 1:5142427/1‑50 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAT > 1:5436493/1‑50 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:4350315/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC < 1:4327316/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:1072781/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:2833109/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 1:269165/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:3202785/50‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:320778/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:3420636/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 1:942423/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:1105057/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:7157270/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:6968542/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:7380804/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:2897994/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:6093109/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:4212541/50‑1 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:1403354/1‑50 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:8476347/1‑50 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:353422/1‑50 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:4746073/1‑50 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:3254798/1‑49 GCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT < 1:7680140/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:3687804/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:8079485/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:5633157/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:4409138/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:6673337/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:1258393/50‑1 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT > 1:5682200/1‑50 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:8500472/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:2728598/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:7204889/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:5595806/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG < 1:5636424/49‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:5679423/1‑50 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:1090617/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:4587429/50‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC < 1:2669957/49‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 1:5463159/1‑50 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 1:4212791/1‑49 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG < 1:2385523/49‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA < 1:4410369/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:5624628/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:4778169/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT > 1:4058784/1‑50 AAGGTAAGTGCAAAGATAAGCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:2443074/49‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG > 1:4902073/1‑50 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 1:1089560/50‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:2593736/1‑50 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 1:7329116/1‑49 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |