| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 144 [0] | [0] 142 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 133 (1.190) | 70/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 144 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 CGACGAGTTTCATGCCGAGTCCGTTGTGCGAGGAAAAATATCAGTATGGC < 1:6898682/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:5944245/50‑1 AGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAAT < 1:4213684/50‑1 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 1:6555087/50‑1 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 1:6733225/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA < 1:3103270/50‑1 TCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAT < 1:3314200/49‑1 CATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC < 1:3370409/49‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA < 1:6489959/50‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 1:7214372/1‑49 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA > 1:1853175/1‑49 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:3134097/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA < 1:8435636/49‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 1:1442187/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 1:2436827/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 1:2016282/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT > 1:2736249/1‑49 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT > 1:5334670/1‑49 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAGATAAA < 1:4043891/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:2350972/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:3307504/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:3458195/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:7875518/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:8584937/50‑1 GTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAG < 1:5810277/50‑1 GTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAG < 1:4005547/50‑1 GTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:4460815/1‑47 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:4754100/1‑46 CCTTTGTGCTAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 1:8217794/1‑49 CCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 1:460291/1‑49 CCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 1:6990454/1‑49 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATA < 1:2220438/50‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATA < 1:796092/50‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT < 1:2441607/49‑1 TTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA > 1:1796462/1‑50 TTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT > 1:6833883/1‑50 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:6132843/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:2270855/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA < 1:1790962/48‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA < 1:3512684/48‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:1855385/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:1046532/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG > 1:7151582/1‑49 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 1:6648391/49‑1 GCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT > 1:2940116/1‑50 GCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT > 1:2669052/1‑50 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGGTAATGCAT < 1:231930/49‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:7316242/1‑50 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC < 1:6286041/50‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:739294/49‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:2796715/49‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCC < 1:4587641/50‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:6045842/1‑49 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:1371175/1‑48 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:1747812/1‑48 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:7630642/50‑1 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT > 1:7912479/1‑50 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:1916019/1‑50 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:6110970/1‑50 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:7028531/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:4409682/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:2176699/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:2818544/1‑50 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT < 1:1099130/50‑1 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 1:2043842/1‑50 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 1:5211261/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 1:2588041/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 1:5499328/1‑49 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 1:5083512/1‑49 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA > 1:7655566/1‑50 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:298459/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 1:1409277/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 1:3371198/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT < 1:3820508/50‑1 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 1:6408962/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT < 1:6267959/50‑1 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT < 1:4281094/49‑1 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT < 1:5929948/49‑1 CAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC > 1:2070773/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT < 1:2592880/50‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT < 1:7603148/50‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:1450538/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:7206674/1‑50 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:564965/1‑49 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:19708/1‑48 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGC < 1:1697481/50‑1 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:1110918/1‑49 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:2128706/1‑49 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG < 1:5086694/49‑1 GCTCAATGCTCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:6194914/1‑50 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 1:3459432/49‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 1:3721511/49‑1 CTCAATGGTCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC < 1:4045316/50‑1 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC < 1:2882571/50‑1 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:3348622/1‑49 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:1645748/1‑49 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:3854282/1‑49 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:2129162/1‑49 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:4244365/1‑49 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:4986866/1‑49 CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |