| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 132 [0] | [0] 139 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 132 (1.160) | 70/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 132 total aligned reads displayed.
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 | aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa < 1:4918509‑M1/50‑2 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa < 1:5151686‑M1/50‑2 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa > 1:6259271‑M1/1‑49 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc < 1:3567264‑M1/50‑5 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc > 1:2729276‑M1/1‑46 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct < 1:4592666‑M1/50‑6 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg > 1:4333737‑M1/1‑44 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg < 1:3050383‑M1/50‑7 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg > 1:4536987‑M1/1‑44 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg < 1:2681116‑M1/50‑7 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg < 1:7877847‑M1/50‑7 (MQ=255) cAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt > 1:2610557‑M1/1‑43 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc > 1:719989‑M1/1‑42 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc > 1:2460487‑M1/1‑42 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:8404577‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:2788840‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt < 1:6638673‑M1/49‑8 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcg < 1:8094626‑M1/50‑10 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcg > 1:3692144‑M1/1‑41 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcg < 1:5669440‑M1/50‑10 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt < 1:4187494‑M1/50‑11 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt > 1:7501544‑M1/1‑40 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt > 1:4358540‑M1/1‑40 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtt < 1:7740568‑M1/50‑12 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtt < 1:5265696‑M1/50‑12 (MQ=255) aaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgttt < 1:1699275‑M1/50‑13 (MQ=255) aaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgttt < 1:5044788‑M1/50‑13 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg > 1:2841591‑M1/1‑37 (MQ=255) tCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgt < 1:6456824‑M1/50‑15 (MQ=255) tCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgt > 1:3020733‑M1/1‑36 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:3930979‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:4263594‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt > 1:5280230‑M1/1‑34 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:1209444‑M1/50‑17 (MQ=255) gCTCATACTGTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:6399212‑M1/50‑17 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga > 1:5920322‑M1/1‑30 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga < 1:8297397‑M1/50‑21 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga > 1:127181‑M1/1‑30 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcg < 1:5856106‑M1/49‑20 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 1:8181407‑M1/48‑19 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:4218367‑M1/50‑22 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:548459‑M1/50‑22 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:1859492‑M1/49‑23 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:5137329‑M1/49‑23 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:5051870‑M1/49‑23 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca < 1:7741478‑M1/49‑26 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca < 1:406513‑M1/49‑26 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca < 1:5356358‑M1/49‑26 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttc < 1:6208663‑M1/48‑25 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa > 1:7588668‑M1/1‑23 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:8484672‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:3408168‑M1/49‑28 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:36618‑M1/49‑28 (MQ=255) tCGGTAAACAGCACCTTTAGGatcctgtcgtttgttttcgatttcaaaat < 1:8312112‑M1/50‑30 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaat < 1:2593033‑M1/50‑30 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:1896706‑M1/1‑21 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:5651139‑M1/1‑21 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat < 1:140713‑M1/50‑32 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata > 1:6086299‑M1/1‑19 (MQ=255) gTAAACAGCACCTTTGGAatcctgtcgtttgttttcgatttcaaaatata < 1:6499032‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 1:204044‑M1/50‑33 (MQ=255) gTAAACAGAACCTTTAGAatcctgtcgtttgttttcgatttcaagatata < 1:6605288‑M1/50‑33 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:6105285‑M1/50‑34 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg < 1:7700886‑M1/50‑36 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:6726816‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:2304868‑M1/49‑35 (MQ=255) aCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatga < 1:7871855‑M1/50‑37 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:603978‑M1/50‑38 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:5107365‑M1/50‑38 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:239495‑M1/50‑38 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 1:2358195‑M1/50‑40 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 1:7048191‑M1/50‑40 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 1:3045748‑M1/50‑40 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatt < 1:1609885‑M1/50‑41 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 1:5582635‑M1/1‑10 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta > 1:3135767‑M1/1‑9 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat < 1:771556‑M1/50‑43 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat < 1:7566530‑M1/50‑43 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcataatataatgaaattatt < 1:7106408‑M1/50‑44 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt > 1:348730‑M1/1‑7 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt > 1:7342765‑M1/1‑7 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt < 1:7099364‑M1/50‑44 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt < 1:7019726‑M1/50‑44 (MQ=255) ttAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg > 1:2426831‑M1/1‑5 (MQ=255) ttAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg > 1:6849871‑M1/1‑5 (MQ=255) ttAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg > 1:234983‑M1/1‑5 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:846621‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:8072326‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:4231117‑M1/48‑45 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:474101‑M1/48‑45 (MQ=255) aGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt > 1:7225000‑M1/1‑3 (MQ=255) aGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt > 1:7929238‑M1/1‑3 (MQ=255) aGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgt < 1:6290537‑M1/49‑47 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt > 1:8589478‑M1/1‑2 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 1:6093930‑M1/50‑49 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt < 1:3726711‑M1/49‑48 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:1714690‑M1/50‑50 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:1401484‑M1/50‑50 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:7388078‑M1/50‑50 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 1:3852124‑M1/50‑50 (MQ=255) | AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |