| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 132 [0] | [0] 139 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 132 (1.160) | 70/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 139 total aligned reads displayed.
GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 | aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa < 1:5151686‑M2/1‑1 (MQ=255)aggcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaa > 1:6259271‑M2/50‑50 (MQ=255) gcatcagaaaatcgctcatactttaatcggtaaacagcacctttagaATc > 1:305978‑M2/48‑50 (MQ=255) catcagaaaatcgctcatactttaatcggtaaacagcacctttagaATcc < 1:3567264‑M2/4‑1 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt < 1:4592666‑M2/5‑1 (MQ=255) atcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCt < 1:268267‑M2/5‑1 (MQ=255) tcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTg > 1:4333737‑M2/45‑50 (MQ=255) tcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTg < 1:7877847‑M2/6‑1 (MQ=255) tcagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTg < 1:2681116‑M2/6‑1 (MQ=255) cagaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGt > 1:2610557‑M2/44‑50 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGt < 1:4823102‑M2/7‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGt < 1:6638673‑M2/7‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:2788840‑M2/8‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc > 1:2565974‑M2/43‑50 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc > 1:719989‑M2/43‑50 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:8404577‑M2/8‑1 (MQ=255) agaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTc < 1:7339403‑M2/8‑1 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg < 1:5669440‑M2/9‑1 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg < 1:8094626‑M2/9‑1 (MQ=255) gaaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCg > 1:3692144‑M2/42‑50 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt < 1:4187494‑M2/10‑1 (MQ=255) aaaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgt > 1:7501544‑M2/41‑50 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt > 1:5548019‑M2/40‑50 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt < 1:5265696‑M2/11‑1 (MQ=255) aaatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtt < 1:7740568‑M2/11‑1 (MQ=255) aatcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgttt < 1:5044788‑M2/12‑1 (MQ=255) atcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttg > 1:2841591‑M2/38‑50 (MQ=255) tcgctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgt < 1:6456824‑M2/14‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt > 1:5280230‑M2/35‑50 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:3930979‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:1209444‑M2/16‑1 (MQ=255) gctcatactttaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:4263594‑M2/16‑1 (MQ=255) gctcatactgtaatcggtaaacagcacctttagaATCCTGTCgtttgttt < 1:6399212‑M2/16‑1 (MQ=255) tcatactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTc > 1:6061341‑M2/33‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:127181‑M2/31‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:4110177‑M2/31‑50 (MQ=255) atactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGa > 1:5920322‑M2/31‑50 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:548459‑M2/21‑1 (MQ=255) tactttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAt < 1:4218367‑M2/21‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAttt < 1:2373517‑M2/23‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:5051870‑M2/22‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:5137329‑M2/22‑1 (MQ=255) ctttaatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGAtt < 1:2061746‑M2/22‑1 (MQ=255) taatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCa < 1:7741478‑M2/25‑1 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa > 1:7588668‑M2/24‑49 (MQ=255) aatcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaa > 1:6738421‑M2/24‑49 (MQ=255) atcggtaaacagcccctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:8288702‑M2/27‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa < 1:8484672‑M2/28‑1 (MQ=255) atcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaa < 1:3408168‑M2/27‑1 (MQ=255) tcggtaaacagcacctttaggATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:8312112‑M2/29‑1 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:1896706‑M2/22‑49 (MQ=255) tcggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCaaaa > 1:1495775‑M2/22‑49 (MQ=255) ggtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAatat < 1:140713‑M2/31‑1 (MQ=255) gtaaacagcacctttggaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:6499032‑M2/32‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:204044‑M2/32‑1 (MQ=255) gtaaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAAtata < 1:8445919‑M2/32‑1 (MQ=255) gtaaacagaacctttagaATCCTGTCGTTTGTTTTCGATTTCAAGAtata < 1:6605288‑M2/32‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa > 1:360469‑M2/18‑50 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:5848532‑M2/33‑1 (MQ=255) taaacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATaa < 1:6105285‑M2/33‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt > 1:4237054‑M2/16‑49 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:2304868‑M2/34‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:753275‑M2/35‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:2923013‑M2/35‑1 (MQ=255) aacagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATg < 1:7700886‑M2/35‑1 (MQ=255) acagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGa < 1:7871855‑M2/36‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:5107365‑M2/37‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:239495‑M2/37‑1 (MQ=255) cagcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaa < 1:603978‑M2/37‑1 (MQ=255) agcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 1:6185051‑M2/38‑1 (MQ=255) gcacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat < 1:3045748‑M2/39‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatt < 1:1609885‑M2/40‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatt < 1:7989873‑M2/40‑1 (MQ=255) cacctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAat > 1:5582635‑M2/11‑49 (MQ=255) acctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAatta > 1:3135767‑M2/10‑50 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat < 1:771556‑M2/42‑1 (MQ=255) cctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattat > 1:7089688‑M2/9‑50 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:4522659‑M2/43‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:7099364‑M2/43‑1 (MQ=255) ctttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:7019726‑M2/43‑1 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg > 1:6849871‑M2/6‑50 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg > 1:234983‑M2/6‑50 (MQ=255) ttagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg > 1:2426831‑M2/6‑50 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAttt < 1:474101‑M2/44‑1 (MQ=255) tagaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg < 1:8072326‑M2/45‑1 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:1772866‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt > 1:7225000‑M2/4‑50 (MQ=255) agaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGt < 1:6290537‑M2/46‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt > 1:8589478‑M2/3‑50 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttt < 1:6093930‑M2/48‑1 (MQ=255) gaATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtt < 1:3726711‑M2/47‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:3852124‑M2/49‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:1714690‑M2/49‑1 (MQ=255) aATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt < 1:7388078‑M2/49‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:2465413/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:3024296/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:3719918/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:1327624/50‑1 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:8185742/1‑49 (MQ=255) atCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGtttt > 1:444195/1‑49 (MQ=255) | GCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTT > NC_000913/2177162‑2177260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |