| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3875268 | 154 (1.350) | 120 (1.440) +CGCGCAGGAAACA |
5/72 | 8.3 | 56.9% | intergenic (‑108/‑170) | dgoR/yidX | putative DNA‑binding transcriptional regulator DgoR/putative lipoprotein YidX |
| ? | NC_000913 | 4641321 = | 95 (0.830) | coding (380/687 nt) | yjtD | putative rRNA methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 157 total aligned reads displayed.
GGCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAG > NC_000913/3875219‑3875316 | ggCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTa < 1:7863432/50‑1 (MQ=255)ggCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTa < 1:7229577/50‑1 (MQ=255) gCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTaa < 1:7169100/50‑1 (MQ=255) gCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTaa < 1:2536472/50‑1 (MQ=255) gCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTaa < 1:2365116/50‑1 (MQ=255) gCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTaa < 1:1070005/50‑1 (MQ=255) cAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAAt < 1:4464092/50‑1 (MQ=255) cAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAAt < 1:3263499/50‑1 (MQ=255) cAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAAt < 1:4521106/50‑1 (MQ=255) cAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAAt < 1:6316544/50‑1 (MQ=255) aaCTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATg < 1:2494230/50‑1 (MQ=255) aaCTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATg < 1:7078428/50‑1 (MQ=255) aCTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATg > 1:3910279/1‑49 (MQ=255) cTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgta < 1:5293294/50‑1 (MQ=255) ttGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtag > 1:347958/1‑49 (MQ=255) ttGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtag > 1:66779/1‑49 (MQ=255) tGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtagt < 1:8397980/49‑1 (MQ=255) gtagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtagta > 1:6860445/1‑49 (MQ=255) gtagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtagta < 1:1798192/49‑1 (MQ=255) gtagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATgtagta > 1:768969/1‑49 (MQ=255) tagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTAc > 1:3416135/1‑49 (MQ=255) tagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 1:2666632/50‑1 (MQ=255) tagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 1:6703540/50‑1 (MQ=255) tagtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 1:1290919/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaaa < 1:8022511/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaaa < 1:4229727/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaaa < 1:6464355/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaaa < 1:5269619/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaaa < 1:5360626/50‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaa < 1:3374923/49‑1 (MQ=255) gtaCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaa < 1:8031744/49‑1 (MQ=255) aCCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACt > 1:880385/1‑50 (MQ=255) ccAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACtt < 1:4547988/50‑1 (MQ=255) ccAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACtt < 1:984762/50‑1 (MQ=255) ccAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACt < 1:4104517/49‑1 (MQ=255) cAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAACCTta < 1:4847936/50‑1 (MQ=255) cAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta < 1:7234948/50‑1 (MQ=255) cAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta > 1:593120/1‑50 (MQ=255) cAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta > 1:7895015/1‑50 (MQ=255) aGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta > 1:8151781/1‑49 (MQ=255) gCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTtata > 1:1968053/1‑50 (MQ=255) gCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTtata < 1:5869553/50‑1 (MQ=255) gCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTtata < 1:5571055/50‑1 (MQ=255) gCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTtata > 1:7826553/1‑50 (MQ=255) cGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTatat > 1:2737196/1‑50 (MQ=255) cGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTatat < 1:544923/50‑1 (MQ=255) cGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTatat < 1:1705278/50‑1 (MQ=255) gTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAtt > 1:6024907/1‑50 (MQ=255) gTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAtt < 1:4385135/50‑1 (MQ=255) gTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAtt < 1:7669382/50‑1 (MQ=255) tgatgaCGTTCGCGTTTGCCGTGTGTGTAATGTAGTACAAACTTATAttg > 1:1947322/1‑50 (MQ=255) tgatgaCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttg > 1:1573885/1‑50 (MQ=255) atgaCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttgtt < 1:8026019/50‑1 (MQ=255) tgaCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttgttg < 1:4522187/50‑1 (MQ=255) tgaCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttgttg < 1:5017880/50‑1 (MQ=255) gaCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttgttg > 1:7944489/1‑49 (MQ=255) aCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATtgttgt < 1:5690413/49‑1 (MQ=255) aCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGta < 1:1895043/50‑1 (MQ=255) aCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGta > 1:1987458/1‑50 (MQ=255) cGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtac > 1:5712366/1‑50 (MQ=255) gTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtac > 1:6242690/1‑49 (MQ=255) gTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtac > 1:6587859/1‑49 (MQ=255) gTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtac > 1:4912848/1‑49 (MQ=255) gTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtac > 1:3505972/1‑49 (MQ=255) ttCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtacta < 1:6967848/50‑1 (MQ=255) cgcgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGtactac < 1:706686/49‑1 (MQ=255) gcgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACaa > 1:3896801/1‑50 (MQ=255) gcgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACa < 1:8273494/49‑1 (MQ=255) cgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAt < 1:2228124/50‑1 (MQ=255) cgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAt < 1:4416075/50‑1 (MQ=255) cgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAt < 1:4642129/50‑1 (MQ=255) cgTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAt < 1:5675353/50‑1 (MQ=255) gTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAtt > 1:5732053/1‑50 (MQ=255) tttGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAttt < 1:1989639/50‑1 (MQ=255) tttGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAttt < 1:161910/50‑1 (MQ=255) tttGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAtt > 1:6572383/1‑49 (MQ=255) tttGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAtt > 1:882008/1‑49 (MQ=255) tGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAtt > 1:4447028/1‑47 (MQ=255) gCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAAtt > 1:680847/1‑46 (MQ=255) gCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAg < 1:1116645/49‑1 (MQ=255) ccGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGa < 1:3657853/49‑1 (MQ=255) cgtgcgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc < 1:7320005/50‑1 (MQ=255) cgtgcgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc < 1:3145771/50‑1 (MQ=255) cgtgcgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc < 1:3737459/50‑1 (MQ=255) cgtgcgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc < 1:6432483/50‑1 (MQ=255) tgcgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcac < 1:3202096/50‑1 (MQ=255) cgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcaca > 1:7746406/1‑49 (MQ=255) cgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcaca > 1:3082673/1‑49 (MQ=255) cgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcaca > 1:2275284/1‑49 (MQ=255) cgtgTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaa < 1:1314091/50‑1 (MQ=255) gtgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa < 1:840962/50‑1 (MQ=255) gtgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaa > 1:3025041/1‑49 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaaa < 1:2724721/50‑1 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaaa < 1:4710665/50‑1 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaaa < 1:4675436/50‑1 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa > 1:4643307/1‑49 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa > 1:4826737/1‑49 (MQ=255) tgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa > 1:5174469/1‑49 (MQ=255) gtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa > 1:7419036/1‑48 (MQ=255) tAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAg < 1:4108280/50‑1 (MQ=255) | GGCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAG > NC_000913/3875219‑3875316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |