| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 132 [0] | [0] 129 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 127 (1.110) | 75/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 132 total aligned reads displayed.
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:4268553/1‑50 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:8191417/50‑1 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:6977587/1‑50 (MQ=255) tttATGCAATATGAAATGCAATGCTTCATATCATTTTCAAGGAGCCGACc > 1:4079298‑M1/1‑49 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:5924646‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg < 1:8339237‑M1/49‑3 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg < 1:1390064‑M1/49‑3 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:2301143‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:6564927‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTACAAGGAGCCGACc < 1:4951079‑M1/48‑2 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:629736‑M1/1‑45 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:6792264‑M1/50‑6 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:3739043‑M1/1‑44 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:752387‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:4646933‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:3111771‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:91281‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:6219954‑M1/1‑43 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:7734390‑M1/1‑42 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:8219954‑M1/1‑42 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:2395383‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:7807103‑M1/50‑10 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:7444401‑M1/50‑11 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:4786881‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:3630642‑M1/49‑12 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:485568‑M1/1‑37 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:4005851‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt < 1:3623304‑M1/49‑14 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt < 1:7656120‑M1/49‑14 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:6284665‑M1/1‑35 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:1588880‑M1/50‑18 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:4413114‑M1/1‑32 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:4922061‑M1/1‑31 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:903367‑M1/50‑20 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:8326451‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:1436416‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:3800257‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:886632‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:6438885‑M1/1‑30 (MQ=255) aTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctga < 1:3389216‑M1/50‑22 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:3268965‑M1/1‑27 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:2034698‑M1/1‑27 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:7495558‑M1/1‑27 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:514009‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:7184464‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:35185‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:6361368‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:6553891‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:4767121‑M1/1‑26 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:4148250‑M1/1‑26 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:6653774‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGTAGCCGACcgaaacagttcgtcgggctgaagat > 1:7120193‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:1378868‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:3297465‑M1/49‑26 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:1623510‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatt < 1:3057190‑M1/49‑27 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:4844133‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat < 1:1103474‑M1/50‑29 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:1948440‑M1/1‑22 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt < 1:4835361‑M1/50‑30 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:6804119‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:3034696‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:4806229‑M1/1‑21 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:2367285‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct > 1:6441174‑M1/1‑19 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:3670465‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:3973497‑M1/50‑32 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:4647880‑M1/1‑18 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:7638208‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:3977282‑M1/1‑17 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:2565593‑M1/50‑35 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:6616728‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:5425700‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:6981481‑M1/50‑35 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 1:4149002‑M1/1‑15 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg < 1:3569460‑M1/49‑36 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:108142‑M1/49‑37 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:4140269‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcg < 1:8020399‑M1/49‑38 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat < 1:4261140‑M1/50‑40 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:1014684‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:1759741‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:7965412‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt > 1:1023397‑M1/1‑9 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:5911156‑M1/50‑42 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt > 1:3890396‑M1/1‑9 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:7439310‑M1/50‑43 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:742399‑M1/50‑43 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg > 1:1999782‑M1/1‑8 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:4609487‑M1/50‑43 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 1:5736484‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 1:4622940‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 1:4537051‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:4116786‑M1/1‑7 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:2649350‑M1/1‑4 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:8233530‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:2747487‑M1/50‑48 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:4827121‑M1/50‑49 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:8535378‑M1/50‑49 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:7684236‑M1/1‑1 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |