| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 132 [0] | [0] 129 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 127 (1.110) | 75/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 129 total aligned reads displayed.
GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614748‑2614845 | ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:5924646‑M2/49‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:6564927‑M2/48‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg < 1:8339237‑M2/2‑1 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg < 1:1390064‑M2/2‑1 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:2301143‑M2/48‑49 (MQ=255) tgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa < 1:6792264‑M2/5‑1 (MQ=255) tgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:629736‑M2/46‑50 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:6219954‑M2/44‑48 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:752387‑M2/7‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:3111771‑M2/7‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:66433‑M2/7‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:91281‑M2/7‑1 (MQ=255) aatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAg > 1:7734390‑M2/43‑50 (MQ=255) aatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAg > 1:8219954‑M2/43‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 1:2395383‑M2/42‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 1:6550134‑M2/42‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt > 1:7648850‑M2/41‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt < 1:7444401‑M2/10‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 1:3630642‑M2/11‑1 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:485568‑M2/38‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:4769727‑M2/38‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:2995632‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc < 1:4005851‑M2/14‑1 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt < 1:3623304‑M2/13‑1 (MQ=255) aatgcaatgtttcatatcattttcgaggagccgacCGAAACAGTtcgtcg < 1:3452796‑M2/15‑1 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg < 1:3979351‑M2/16‑1 (MQ=255) tgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCggg < 1:1588880‑M2/17‑1 (MQ=255) tgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCggg < 1:6024509‑M2/17‑1 (MQ=255) gcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGc > 1:4413114‑M2/33‑50 (MQ=255) caatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt < 1:903367‑M2/19‑1 (MQ=255) caatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:4922061‑M2/32‑50 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:886632‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 1:3800257‑M2/20‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 1:8326451‑M2/20‑1 (MQ=255) atgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGa < 1:3389216‑M2/21‑1 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:3197290‑M2/29‑48 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:6838073‑M2/29‑48 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:7495558‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:2034698‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:3268965‑M2/28‑47 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:4767121‑M2/27‑46 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:4148250‑M2/27‑46 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAg < 1:6361368‑M2/23‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAg < 1:35185‑M2/23‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAg < 1:6553891‑M2/23‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGa < 1:514009‑M2/24‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGa < 1:3633300‑M2/24‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGa < 1:7184464‑M2/24‑1 (MQ=255) ttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:4636144‑M2/26‑50 (MQ=255) ttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:6653774‑M2/26‑50 (MQ=255) tcatatcattttcaagtagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:7120193‑M2/25‑49 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:1378868‑M2/25‑49 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 1:1623510‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:3057190‑M2/26‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 1:1948440‑M2/23‑50 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat < 1:1103474‑M2/28‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 1:4923117‑M2/23‑50 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt > 1:4167366‑M2/22‑50 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt > 1:4806229‑M2/22‑50 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt < 1:4835361‑M2/29‑1 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:5624109‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:2367285‑M2/21‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt < 1:3670465‑M2/31‑1 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt > 1:6441174‑M2/20‑50 (MQ=255) cattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt > 1:4647880‑M2/19‑50 (MQ=255) cattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt > 1:7638208‑M2/19‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:2502151‑M2/18‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:3977282‑M2/18‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc < 1:6981481‑M2/34‑1 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc > 1:4842291‑M2/17‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc > 1:5425700‑M2/17‑50 (MQ=255) tcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcgc < 1:108142‑M2/36‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg < 1:8020399‑M2/37‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 1:4140269‑M2/13‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa < 1:3848870‑M2/38‑1 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt < 1:4261140‑M2/39‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 1:1759741‑M2/11‑50 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt < 1:7965412‑M2/40‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 1:1014684‑M2/11‑50 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 1:6359830‑M2/11‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 1:3890396‑M2/10‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 1:1023397‑M2/10‑50 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg > 1:4134453‑M2/9‑50 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:742399‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:7439310‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg > 1:1999782‑M2/9‑50 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:4609487‑M2/42‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 1:4622940‑M2/43‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 1:4537051‑M2/43‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 1:5736484‑M2/43‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc > 1:4116786‑M2/8‑50 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc < 1:1556533‑M2/44‑1 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa > 1:2649350‑M2/5‑50 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa > 1:8233530‑M2/5‑50 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:2747487‑M2/47‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:8535378‑M2/48‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:4827121‑M2/48‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:7782335‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg > 1:7684236‑M2/2‑50 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg > 1:1341054/1‑50 (MQ=255) | GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614748‑2614845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |