| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 111 [0] | [0] 110 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 105 (0.960) | 61/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 111 total aligned reads displayed.
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 | cTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:6453716‑M1/50‑1 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:6849781‑M1/1‑49 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:1526421‑M1/1‑49 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:3022584‑M1/1‑48 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:5367353‑M1/1‑48 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:1397226‑M1/1‑48 (MQ=255) gTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac > 1:4718880‑M1/1‑48 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact < 1:777128‑M1/50‑4 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:3568611‑M1/49‑3 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:3219714‑M1/49‑3 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:5516564‑M1/48‑2 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:92779‑M1/48‑2 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta > 1:1402692‑M1/1‑45 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:7607357‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta > 1:373821‑M1/1‑45 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:5877338‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactt < 1:3204939‑M1/49‑5 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat > 1:6016278‑M1/1‑44 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:5065269‑M1/50‑8 (MQ=255) ttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:7540087‑M1/1‑42 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:2096468‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:5476667‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt > 1:3451824‑M1/1‑41 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa > 1:6932580‑M1/1‑40 (MQ=255) tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac > 1:2109222‑M1/1‑38 (MQ=255) tACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac > 1:617684‑M1/1‑38 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa > 1:2734536‑M1/1‑37 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:2798941‑M1/49‑13 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:7784105‑M1/49‑13 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:7140907‑M1/49‑13 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:5529323‑M1/49‑13 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:6926716‑M1/49‑13 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaaca < 1:1105948‑M1/49‑13 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac > 1:2555516‑M1/1‑36 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac > 1:4818751‑M1/1‑36 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:6369576‑M1/50‑15 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact > 1:5154427‑M1/1‑35 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact > 1:3542633‑M1/1‑35 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact < 1:1098328‑M1/50‑16 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:6078606‑M1/1‑34 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:5731731‑M1/1‑34 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:8593032‑M1/50‑17 (MQ=255) ccGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg > 1:5946660‑M1/1‑32 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga > 1:3703758‑M1/1‑31 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga > 1:7270621‑M1/1‑31 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:6559118‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:5322900‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:7084763‑M1/48‑18 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:4674670‑M1/50‑21 (MQ=255) cTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa < 1:2721981‑M1/50‑22 (MQ=255) cTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:2774397‑M1/1‑29 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:272537‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:6915037‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:1843363‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:1655580‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:1447701‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:4853893‑M1/1‑28 (MQ=255) ataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat > 1:5859727‑M1/1‑27 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:6881725‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:5295740‑M1/48‑23 (MQ=255) aGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag > 1:788493‑M1/1‑25 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg > 1:1009495‑M1/1‑24 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg > 1:1795832‑M1/1‑24 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataagg < 1:6708145‑M1/50‑27 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:7862938‑M1/1‑22 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:1071476‑M1/1‑22 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt > 1:1767516‑M1/1‑20 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:5762948‑M1/49‑30 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:5305621‑M1/49‑30 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg < 1:6568795‑M1/48‑29 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:845169‑M1/1‑19 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:3367702‑M1/1‑19 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt < 1:6075638‑M1/49‑31 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:4452510‑M1/49‑34 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:4347827‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:207295‑M1/49‑35 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:1163488‑M1/1‑14 (MQ=255) aTCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctg > 1:8125610‑M1/1‑13 (MQ=255) tCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctgg > 1:7628122‑M1/1‑12 (MQ=255) tCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctgg > 1:2483522‑M1/1‑12 (MQ=255) tttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggt > 1:2932245‑M1/1‑10 (MQ=255) ttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt > 1:5609944‑M1/1‑9 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:4983435‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctg < 1:235608‑M1/45‑38 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:4704015‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:5172406‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:5227105‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:1197217‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:641453‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:514810‑M1/40‑33 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtt < 1:637265‑M1/50‑45 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt < 1:8133004‑M1/49‑44 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:609426‑M1/1‑6 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:8256524‑M1/1‑4 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta < 1:769100‑M1/49‑46 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:2971028‑M1/1‑3 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:342138‑M1/1‑3 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa < 1:5617036‑M1/50‑49 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa > 1:8189953‑M1/1‑1 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa > 1:5118086‑M1/1‑1 (MQ=255) | CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |