| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,888,432 | Δ18,167 bp | tnaC–bglG | 17 genes tnaC, tnaA, tnaB, mdtL, yidZ, yieE, yieF, adeP, yieH, cbrB, cbrC, yieK, yieL, bglH, bglB, bglF, bglG |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3888432 | 3906598 | 18167 | 60 [0] | [0] 61 | tnaC–bglG | tnaC,tnaA,tnaB,mdtL,yidZ,yieE,yieF,adeP,yieH,cbrB,cbrC,yieK,yieL,bglH,bglB,bglF,bglG |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3888431 | 0 (0.000) | 58 (0.520) | 43/96 | 0.4 | 100% | intergenic (+239/‑4) | mnmE/tnaC | 5‑carboxymethylaminomethyluridine‑tRNA synthase GTPase subunit/tnaAB operon leader peptide |
| ? | NC_000913 | 3906599 = | 0 (0.000) | intergenic (‑32/+254) | bglG/phoU | transcriptional antiterminator BglG/negative regulator of the pho regulon | |||||
GGTGATTTGCATGTTCATAGCAAGGACCTTTTTTATAAACAAAAAAACCCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATGCAG > NC_000913/3906550‑3906648 | aaaactctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcc > 1:8551244‑M2/50‑50 (MQ=255)aaaactctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcc > 1:5138344‑M2/50‑50 (MQ=255)aaaactctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcc < 1:6256677‑M2/1‑1 (MQ=255) aaactctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcc > 1:6970839‑M2/49‑49 (MQ=255) actctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGAc > 1:856758‑M2/47‑50 (MQ=255) actctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGAc > 1:6435857‑M2/47‑50 (MQ=255) actctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGAc > 1:7344819‑M2/47‑50 (MQ=255) ctctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACt > 1:4094551‑M2/46‑50 (MQ=255) ctctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACt > 1:76207‑M2/46‑50 (MQ=255) tctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACtt > 1:7771958‑M2/45‑50 (MQ=255) tctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACtt > 1:3204749‑M2/45‑50 (MQ=255) ctgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACtt > 1:5236312‑M2/44‑49 (MQ=255) tgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACtt < 1:3401105‑M2/6‑1 (MQ=255) tgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACtt < 1:1254188‑M2/6‑1 (MQ=255) tgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCa > 1:3144656‑M2/43‑50 (MQ=255) tgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCa > 1:1502384‑M2/43‑50 (MQ=255) tgagtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCa > 1:5277939‑M2/43‑50 (MQ=255) agtgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCAcc < 1:1442390‑M2/10‑1 (MQ=255) tgtaataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAg < 1:7314029‑M2/12‑1 (MQ=255) taataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGt < 1:5709071‑M2/13‑1 (MQ=255) taataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTa > 1:6510435‑M2/37‑50 (MQ=255) taataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTa < 1:6375293‑M2/14‑1 (MQ=255) ataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTAt < 1:7714360‑M2/15‑1 (MQ=255) ataatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTAt < 1:4403152‑M2/15‑1 (MQ=255) taatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATtc > 1:4774420‑M2/34‑50 (MQ=255) aatgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATtct > 1:1662140‑M2/33‑50 (MQ=255) atgtagcctcgtgtcttgcgaggataagtgtCGACTTCACCAGTATtct < 1:4705301‑M2/18‑1 (MQ=255) atgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATtctc < 1:4600253‑M2/19‑1 (MQ=255) tgtagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTctct > 1:7159656‑M2/31‑50 (MQ=255) gtagcctcgcgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTg > 1:580571‑M2/30‑50 (MQ=255) tagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTgg > 1:5636102‑M2/29‑50 (MQ=255) tagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTgg > 1:7497954‑M2/29‑50 (MQ=255) tagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTg < 1:190623‑M2/21‑1 (MQ=255) tagcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTg < 1:7224346‑M2/21‑1 (MQ=255) gcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGtt < 1:117018‑M2/24‑1 (MQ=255) gcctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGtt < 1:4036445‑M2/24‑1 (MQ=255) cctcgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTa < 1:6377873‑M2/25‑1 (MQ=255) cgtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGt > 1:2343251‑M2/23‑50 (MQ=255) gtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGt > 1:7285122‑M2/22‑49 (MQ=255) gtgtcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTc < 1:3777977‑M2/29‑1 (MQ=255) tcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAg < 1:1267843‑M2/31‑1 (MQ=255) tcttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAg < 1:8513346‑M2/31‑1 (MQ=255) cttgcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGt > 1:3332875‑M2/18‑50 (MQ=255) gcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGtttt > 1:1038136‑M2/15‑50 (MQ=255) gcgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGttt < 1:872024‑M2/35‑1 (MQ=255) cgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGtttt < 1:6534856‑M2/36‑1 (MQ=255) cgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTg > 1:4171813‑M2/14‑50 (MQ=255) cgaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTg > 1:3744566‑M2/14‑50 (MQ=255) gaggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGc > 1:4697949‑M2/13‑50 (MQ=255) aggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGcc < 1:2882408‑M2/39‑1 (MQ=255) aggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGcc < 1:1826150‑M2/39‑1 (MQ=255) aggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGcc > 1:7927068‑M2/12‑50 (MQ=255) ggataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCt > 1:8055778‑M2/11‑50 (MQ=255) gataagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTg < 1:6255043‑M2/41‑1 (MQ=255) aagtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCg > 1:1490222‑M2/7‑49 (MQ=255) agtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGaa < 1:3397577‑M2/45‑1 (MQ=255) agtgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGa < 1:6600230‑M2/44‑1 (MQ=255) tgcCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATg > 1:7802214‑M2/4‑50 (MQ=255) cCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATg > 1:359947‑M2/2‑48 (MQ=255) cCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATGc < 1:8251164‑M2/48‑1 (MQ=255) cGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATGCAg > 1:245634/1‑50 (MQ=255) | GGTGATTTGCATGTTCATAGCAAGGACCTTTTTTATAAACAAAAAAACCCGACTTCACCAGTATTCTCTGGTTATGTCAGGTTTTGCCTGCGAATGCAG > NC_000913/3906550‑3906648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |