| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 10 (0.090) | 151 (1.380) | 76/98 | 0.0 | 93.5% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 11 (0.100) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 164 total aligned reads displayed.
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 | tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 2:1734680/50‑1 (MQ=255) gCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 2:4393105‑M1/1‑49 (MQ=255) gCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:1995436‑M1/1‑49 (MQ=255) gCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 2:3068096‑M1/1‑49 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:1381956‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 2:610659‑M1/49‑2 (MQ=255) gTCGATGCCACATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 2:4110596‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgga < 1:3470774‑M1/50‑4 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:3360188‑M1/1‑47 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACt < 2:1479066/50‑1 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 2:4820040‑M1/50‑5 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 1:1525050‑M1/50‑5 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:3363701‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:4301189‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:891126‑M1/49‑6 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc > 1:4369766‑M1/1‑43 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc > 1:10437‑M1/1‑43 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc < 2:5104187‑M1/50‑8 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg < 1:972520‑M1/50‑9 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg < 1:3826313‑M1/50‑9 (MQ=255) tGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTcgaacgcg < 2:3906688‑M1/50‑9 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc < 2:2996925‑M1/49‑10 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 1:4833417‑M1/50‑12 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 1:1898461‑M1/50‑12 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 2:5307029‑M1/1‑39 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:4769136‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:5121642‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:2276710‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:1287192‑M1/1‑38 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCg < 1:5074415/50‑1 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga > 2:768098‑M1/1‑36 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 2:2033295‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 2:5169978‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:4833929‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGt > 1:3733512/1‑50 (MQ=255) cgcCACCCTAAAGCAGCGCTTCCGCAATGAGGTggaacgcgcaatgacga < 1:3869080‑M1/50‑18 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGCTGTggaacgcgcaatgacga > 1:5273560‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 1:4918620‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 2:747142‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 2:5056479‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:1557594‑M1/49‑17 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:669746‑M1/49‑17 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 2:2311287‑M1/50‑19 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:1884349‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:717815‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 2:1948679‑M1/1‑31 (MQ=255) cACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatca > 1:977804‑M1/1‑30 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 2:3727322‑M1/50‑22 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc < 1:3246469‑M1/50‑23 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 2:3104707‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca > 2:1509950‑M1/1‑26 (MQ=255) tAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat > 2:3059344‑M1/1‑25 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat < 1:2615117‑M1/48‑26 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat < 1:523791‑M1/48‑26 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 2:107966‑M1/50‑29 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:5380444‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 2:3457491‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:4296203‑M1/50‑31 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg < 2:1858185‑M1/50‑32 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg < 2:3725168‑M1/50‑32 (MQ=255) agcGCATCCGCAATGATGTggaacgagcaatgacgatcatccatcctctg > 2:4493882‑M1/1‑19 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc > 1:3429739‑M1/1‑18 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc < 2:2673402‑M1/50‑33 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct < 1:2444460‑M1/50‑34 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:3884724‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:2479870‑M1/1‑14 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcc < 1:3959979‑M1/50‑38 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 2:2836485‑M1/1‑13 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:2124909‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 2:3619810‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 2:4797265‑M1/49‑39 (MQ=255) gCAATGCTGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 2:4645347‑M1/1‑10 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagt < 2:100596‑M1/50‑41 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:2822341‑M1/1‑10 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccagcctctgcttgccagt < 2:4120505‑M1/50‑41 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 2:4910746‑M1/1‑9 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 2:2849104‑M1/1‑9 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:5338202‑M1/1‑8 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:3544418‑M1/1‑8 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:4960543‑M1/1‑8 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:4692972‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 2:5108927‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:2157427‑M1/1‑7 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 2:894617‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:4556693‑M1/1‑6 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 2:3489706‑M1/1‑5 (MQ=255) gatgTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACt > 1:1586661/1‑49 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 2:356319‑M1/1‑4 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 2:287793‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 1:1121898‑M1/49‑46 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 2:1235793‑M1/50‑48 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 1:5350980‑M1/50‑48 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 1:1170617‑M1/50‑48 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:3904522‑M1/1‑2 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:2672659‑M1/1‑2 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 2:3188364‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:4087475‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:3400951‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 2:3698508‑M1/49‑49 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:4556360‑M1/49‑49 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |