| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 10 (0.090) | 151 (1.380) | 76/98 | 0.0 | 93.5% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 11 (0.100) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 162 total aligned reads displayed.
CTTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549568‑549665 | gcgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg > 2:4393105‑M2/50‑50 (MQ=255)gcgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg > 1:1995436‑M2/50‑50 (MQ=255) cgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtgg < 1:3365963‑M2/2‑1 (MQ=255) cgtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtg < 2:610659‑M2/1‑1 (MQ=255) gtcgatgccacatgcgccaccctaaagcagcgcatccgcaatgatgtgg > 2:4110596‑M2/48‑49 (MQ=255) gtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtgg > 1:3360188‑M2/48‑49 (MQ=255) gtcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGa < 1:5173717‑M2/3‑1 (MQ=255) tcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGaa < 2:4820040‑M2/4‑1 (MQ=255) tcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGaa < 1:1525050‑M2/4‑1 (MQ=255) tcgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGaa < 1:4579018‑M2/4‑1 (MQ=255) cgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc > 2:5072073‑M2/46‑50 (MQ=255) cgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc > 2:3521733‑M2/46‑50 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc < 1:891126‑M2/5‑1 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc < 1:4301189‑M2/5‑1 (MQ=255) atgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcgc > 1:10437‑M2/44‑50 (MQ=255) atgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcgc > 1:4369766‑M2/44‑50 (MQ=255) atgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcgc < 2:5166024‑M2/7‑1 (MQ=255) tgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcgcg < 1:3826313‑M2/8‑1 (MQ=255) tgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAcgcg < 1:972520‑M2/8‑1 (MQ=255) tgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtCGAAcgcg < 2:3906688‑M2/8‑1 (MQ=255) ccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACgcgc < 2:2996925‑M2/9‑1 (MQ=255) caaatgcgccaccctaaagcagcgcctccgcaatcatgtGGAACGCGCaa > 2:463660‑M2/40‑50 (MQ=255) caaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCaa > 2:5307029‑M2/40‑50 (MQ=255) caaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCaa < 1:1898461‑M2/11‑1 (MQ=255) cgcTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAAt < 1:5142034/50‑1 (MQ=255) aaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:4769136‑M2/12‑1 (MQ=255) aaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt > 1:4886445‑M2/39‑50 (MQ=255) aaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:2276710‑M2/12‑1 (MQ=255) aatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATg < 2:4163327‑M2/13‑1 (MQ=255) atgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGa > 2:768098‑M2/37‑50 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 2:1286787‑M2/15‑1 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 1:4833929‑M2/15‑1 (MQ=255) tgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGAc < 2:3062743‑M2/15‑1 (MQ=255) ggAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGAc > 1:3339269/1‑49 (MQ=255) cgccaccctagagcagcgcatccgcaatgatgtGGAACGCGCAATGACGa < 2:1995381‑M2/17‑1 (MQ=255) cgccaccctaaagcagcgcatccgcaatgctgtGGAACGCGCAATGACGa > 1:5273560‑M2/34‑50 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACg < 1:669746‑M2/16‑1 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGa > 2:747142‑M2/34‑50 (MQ=255) gccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGat > 2:2114901‑M2/33‑50 (MQ=255) ccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatc < 1:1884349‑M2/19‑1 (MQ=255) ccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcatc < 1:3246469‑M2/22‑1 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatcca > 2:1509950‑M2/27‑50 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatcca < 2:3104707‑M2/24‑1 (MQ=255) taaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccat > 2:3059344‑M2/26‑50 (MQ=255) gCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATcatccatc > 1:990481/1‑50 (MQ=255) aaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccatc > 1:4830767‑M2/25‑50 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccat < 1:523791‑M2/25‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccat < 1:2615117‑M2/25‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCatccatcc > 2:3295853‑M2/24‑50 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCatccatcc < 2:3700144‑M2/27‑1 (MQ=255) agcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCct < 2:107966‑M2/28‑1 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctct < 1:5380444‑M2/30‑1 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctct < 2:3457491‑M2/30‑1 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctct < 1:4296203‑M2/30‑1 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTg > 1:2614354‑M2/20‑50 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTg < 1:1318199‑M2/31‑1 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTg < 2:3725168‑M2/31‑1 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTg < 2:1858185‑M2/31‑1 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTg > 1:867934‑M2/20‑50 (MQ=255) agcgcatccgcaatgatgtGGAACGAGCAATGACGATCATCCATCCTCTg > 2:4493882‑M2/20‑50 (MQ=255) gcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGc < 2:2673402‑M2/32‑1 (MQ=255) gcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGc > 1:3429739‑M2/19‑50 (MQ=255) aGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGc > 2:5015321/1‑50 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCtt > 1:3428447‑M2/17‑50 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCtt < 1:3484025‑M2/34‑1 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:2479870‑M2/15‑50 (MQ=255) atccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:3884724‑M2/15‑50 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGcc < 1:3959979‑M2/37‑1 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 2:2836485‑M2/14‑49 (MQ=255) ggTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 2:1813975/1‑48 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 2:1203983‑M2/12‑50 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag < 2:3619810‑M2/39‑1 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCa < 2:4797265‑M2/38‑1 (MQ=255) gcaatgctgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 2:4645347‑M2/11‑49 (MQ=255) gcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagt < 1:983247‑M2/40‑1 (MQ=255) gcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 1:2822341‑M2/11‑49 (MQ=255) gcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 1:1413257‑M2/11‑49 (MQ=255) caatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 2:4910746‑M2/10‑48 (MQ=255) caatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 2:5001256‑M2/10‑48 (MQ=255) caatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 2:2849104‑M2/10‑48 (MQ=255) aatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag > 2:5283179‑M2/9‑50 (MQ=255) aatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag > 1:3544418‑M2/9‑50 (MQ=255) aatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag > 1:4919498‑M2/9‑50 (MQ=255) aatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag < 2:1575581‑M2/42‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 2:377736‑M2/43‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 2:5108927‑M2/43‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag > 2:2157427‑M2/8‑49 (MQ=255) tgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAgtagta < 2:894617‑M2/44‑1 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGtagtag < 1:1121898‑M2/45‑1 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgc > 2:356319‑M2/5‑50 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgc < 2:2849205‑M2/46‑1 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgc > 1:2370668‑M2/5‑50 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg < 1:5350980‑M2/47‑1 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg < 1:1170617‑M2/47‑1 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg > 1:3904522‑M2/3‑49 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg > 1:2672659‑M2/3‑49 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCa > 2:2398914‑M2/2‑50 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCa > 1:5365863‑M2/2‑50 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCa > 1:4087475‑M2/2‑50 (MQ=255) aGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcgc < 1:1203484/49‑1 (MQ=255) | CTTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549568‑549665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |