| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 13 (0.120) | 128 (1.170) | 63/98 | 0.0 | 90.8% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 13 (0.120) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 142 total aligned reads displayed.
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT > NC_000913/675503‑675598 | gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa < 1:4818381‑M1/50‑2 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:2661979‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:807928‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 2:3051203‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat > 2:1022957‑M1/1‑48 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCgg > 1:1984140/1‑50 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:2857673‑M1/1‑45 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 2:1843860‑M1/1‑45 (MQ=255) aTTTCGCGCAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc < 1:2191662‑M1/49‑6 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcg < 1:707618‑M1/50‑7 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc < 1:4087878‑M1/49‑6 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg < 2:2594094‑M1/48‑5 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg < 2:597808‑M1/47‑4 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg < 2:2936546‑M1/47‑4 (MQ=255) tttCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 2:5306995‑M1/1‑43 (MQ=255) tttCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 2:2082690‑M1/1‑43 (MQ=255) tttCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCt < 1:1309572/50‑1 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt > 2:2790221‑M1/1‑40 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt < 2:219187‑M1/49‑10 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 2:660150‑M1/1‑39 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 2:1531382‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 2:2510842‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:1934110‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 1:3494750‑M1/1‑38 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 2:5328744‑M1/1‑38 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg > 1:1310510‑M1/1‑37 (MQ=255) caGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgc < 2:422447‑M1/50‑15 (MQ=255) caGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctga < 1:315‑M1/50‑15 (MQ=255) caGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGttttt < 1:3036705/50‑1 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca < 1:1042137‑M1/50‑16 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat < 2:4543466‑M1/50‑17 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:433173‑M1/50‑17 (MQ=255) aaTAAAGAGGATATGGGCCGAATGAAATTCCCatggcgagttctgcatta < 1:5378936‑M1/50‑19 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatta < 1:1095912‑M1/50‑19 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatta > 2:5275723‑M1/1‑32 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat < 1:4108008‑M1/50‑20 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat < 2:115264‑M1/50‑20 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat > 1:312317‑M1/1‑31 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagctctgcattat > 1:4963576‑M1/1‑31 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATctct < 2:4779470/50‑1 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcca < 2:1748137‑M1/50‑23 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcc < 2:1115348‑M1/49‑22 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa < 2:2311027/49‑1 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTAc < 2:24801/50‑1 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat < 2:4755866‑M1/50‑24 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat < 2:2996517‑M1/50‑24 (MQ=255) gagaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccatt < 2:2496582‑M1/50‑25 (MQ=255) gagaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccatt < 2:2973165‑M1/50‑25 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgc < 1:1583535‑M1/50‑27 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgc < 2:1388549‑M1/50‑27 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattg > 2:2658294‑M1/1‑24 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca < 1:674558‑M1/50‑28 (MQ=255) aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTaa < 1:2180282/50‑1 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat > 2:1682402‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat < 2:2788028‑M1/50‑29 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat < 2:42670‑M1/50‑29 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat > 2:4889744‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcat > 1:2509167‑M1/1‑22 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt > 2:4351604‑M1/1‑21 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 2:1873103‑M1/50‑30 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 1:1546767‑M1/50‑30 (MQ=255) tatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt < 1:734782/50‑1 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 1:1491520‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 1:1394489‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 1:1768097‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 2:4326120‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 1:2583723‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattt < 2:4125691‑M1/49‑31 (MQ=255) gggCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 2:1369006‑M1/1‑18 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttata < 2:3317702‑M1/50‑34 (MQ=255) gCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttatat < 1:1338230‑M1/50‑35 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatc < 1:1467300‑M1/50‑36 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 2:2318111‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 2:789042‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 1:59596‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 1:5324859‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:4343092‑M1/1‑13 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 2:5087933‑M1/50‑38 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:1402295‑M1/1‑12 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 1:785385‑M1/50‑40 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 2:928604‑M1/50‑41 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 2:140370‑M1/50‑41 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 1:4886178‑M1/50‑41 (MQ=255) gAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 2:2030505‑M1/1‑9 (MQ=255) aaaTTCCCatggcgagttctgcattatcccttgcatttatatcttga > 1:3861368‑M1/1‑8 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag < 1:2422129‑M1/50‑43 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaa < 2:1975004‑M1/49‑42 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:2823091‑M1/1‑8 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttga > 2:5171866‑M1/1‑8 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaaga < 2:1855141‑M1/50‑44 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaagaa < 2:4829846‑M1/50‑45 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaagaa < 1:4102118‑M1/50‑45 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 1:1079828‑M1/50‑46 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 2:3615251‑M1/50‑46 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 1:3883550‑M1/50‑46 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 2:1705841‑M1/50‑46 (MQ=255) tCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 2:1055650‑M1/1‑4 (MQ=255) ccccGGCCCTTGTTTTTATCTCTACAGTAACTCTTCAGTCTCACGAAttt > 1:3563493/1‑50 (MQ=255) cccatggggagttctgcattatccactgcatttatatcttaaaacaaag < 2:3431671‑M1/49‑47 (MQ=255) ccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:2835361‑M1/1‑2 (MQ=255) | GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT > NC_000913/675503‑675598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |