| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 13 (0.120) | 128 (1.170) | 63/98 | 0.0 | 90.8% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 13 (0.120) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 143 total aligned reads displayed.
GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 | gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca < 1:4818381‑M2/1‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt > 2:1022957‑M2/49‑50 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 2:3051203‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:807928‑M2/2‑1 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:2857673‑M2/46‑50 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 2:4533266‑M2/46‑50 (MQ=255) atttcgcgcagcaataaagagaatatgggccgaatgaaattcccATGGc < 1:2191662‑M2/5‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg < 2:2594094‑M2/4‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 2:2936546‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 1:221730‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 2:597808‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc < 1:4087878‑M2/5‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:707618‑M2/6‑1 (MQ=255) tttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 2:5306995‑M2/44‑48 (MQ=255) cAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGa < 2:1454330/49‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 2:219187‑M2/9‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:2651311‑M2/40‑50 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:4129437‑M2/40‑50 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 2:660150‑M2/40‑50 (MQ=255) aCGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTc > 1:1886255/1‑50 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt < 1:1934110‑M2/12‑1 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt > 1:3494750‑M2/39‑50 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt < 2:2510842‑M2/12‑1 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:1310510‑M2/38‑50 (MQ=255) cAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCa < 1:5023318/50‑1 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa < 1:1042137‑M2/15‑1 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 2:4543466‑M2/16‑1 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 2:1790717‑M2/35‑50 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 1:3326443‑M2/16‑1 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 1:433173‑M2/16‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 2:2007830‑M2/17‑1 (MQ=255) aataaagaggatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa < 1:5378936‑M2/18‑1 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa < 1:1095912‑M2/18‑1 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 2:5275723‑M2/33‑50 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt > 1:312317‑M2/32‑50 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt < 1:4108008‑M2/19‑1 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt < 1:4023658‑M2/19‑1 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGCTCTGCATTAt > 1:4963576‑M2/32‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 2:1152476‑M2/20‑1 (MQ=255) aaaCTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTAt < 2:2239114/49‑1 (MQ=255) aaaCTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTAt < 1:3777493/49‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 2:1860346‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 2:1632693‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 2:1115348‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa < 2:1748137‑M2/22‑1 (MQ=255) cTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCAt < 2:5250005/50‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 2:2385509‑M2/24‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 2:2973165‑M2/24‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 1:1504548‑M2/24‑1 (MQ=255) gaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg > 2:4311050‑M2/25‑49 (MQ=255) gaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGc < 2:1388549‑M2/26‑1 (MQ=255) gaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGc < 1:1583535‑M2/26‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa < 1:674558‑M2/27‑1 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 2:1682402‑M2/23‑50 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt < 2:42670‑M2/28‑1 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt < 2:2788028‑M2/28‑1 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 2:4889744‑M2/23‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 2:2514555‑M2/29‑1 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:1677162‑M2/22‑50 (MQ=255) atgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 2:2711142‑M2/21‑49 (MQ=255) atgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 2:2997743‑M2/21‑49 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAttt < 2:4125691‑M2/30‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta < 1:1491520‑M2/31‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta < 2:4326120‑M2/31‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta < 1:1394489‑M2/31‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta < 1:2583723‑M2/31‑1 (MQ=255) gggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta > 2:1369006‑M2/19‑49 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata < 2:3317702‑M2/33‑1 (MQ=255) gccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTatat < 1:1338230‑M2/34‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc > 2:3777112‑M2/16‑50 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:1467300‑M2/35‑1 (MQ=255) ccGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTatat < 2:1548397/49‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 2:2318111‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:59596‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:5324859‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:520571‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 2:5087933‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:4343092‑M2/14‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:2824534‑M2/37‑1 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:1402295‑M2/13‑49 (MQ=255) gaTCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 2:944053/50‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:785385‑M2/39‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 2:140370‑M2/40‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 2:928604‑M2/40‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 1:4886178‑M2/40‑1 (MQ=255) gaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 2:2030505‑M2/10‑48 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:2422129‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 2:1975004‑M2/41‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:2823091‑M2/9‑47 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 2:5171866‑M2/9‑47 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga < 2:1855141‑M2/43‑1 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa < 2:4829846‑M2/44‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:1079828‑M2/45‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:3883550‑M2/45‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:3003919‑M2/45‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 2:3615251‑M2/45‑1 (MQ=255) tcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa > 2:1055650‑M2/5‑49 (MQ=255) cccATGGGGAGTTCTGCATTATCCACTGCATTTATATCTtaaaacaaag < 2:3431671‑M2/46‑2 (MQ=255) cccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaa < 1:3755434‑M2/46‑1 (MQ=255) ccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa < 1:568018/50‑1 (MQ=255) | GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |