| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 5 (0.050) | 121 (1.150) | 66/94 | 0.0 | 95.3% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 7 (0.070) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 135 total aligned reads displayed.
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:5010285‑M1/50‑1 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:2412516‑M1/1‑50 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 2:2472845‑M1/50‑1 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 2:3684570‑M1/1‑49 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:265052‑M1/50‑2 (MQ=255) aaGGCAACTGGTGATTTTTATTGATTGCCGAGTTTCGCATACAATGAAcg > 1:2244778‑M1/1‑48 (MQ=255) aGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgt > 1:2407067‑M1/1‑47 (MQ=255) aGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgt < 1:3382803‑M1/50‑4 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:237068‑M1/50‑5 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:5078453‑M1/50‑6 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 2:4191229‑M1/1‑45 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 2:5295419‑M1/1‑45 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 2:3709878‑M1/1‑44 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:613493‑M1/1‑44 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 2:2854578‑M1/1‑44 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctac < 2:2331504‑M1/50‑8 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:1136743‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:4313861‑M1/50‑9 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac < 2:5095432‑M1/50‑10 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 2:2637593‑M1/1‑40 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 2:3730650‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:4086182‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 2:1909329‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:2983180‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:4667120‑M1/50‑13 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac > 2:4001239‑M1/1‑37 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac < 2:1556180‑M1/50‑14 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 1:2662472‑M1/1‑36 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 2:2667316‑M1/1‑36 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 1:660360‑M1/1‑36 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 2:4654339‑M1/1‑35 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 2:1811061‑M1/1‑35 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 2:4010356‑M1/1‑35 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 2:4711852‑M1/1‑35 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGaa < 2:4344314/49‑1 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc < 2:4782838‑M1/50‑17 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 1:1921696‑M1/1‑33 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 2:4280370‑M1/1‑33 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 2:2286206‑M1/1‑33 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACg > 2:1299950/1‑50 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 2:4165666‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 2:5354761‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 2:3688354‑M1/1‑32 (MQ=255) ttATTGATTGCTGAGTTTTGAATACGTTGAAcgtctacacttactcctg < 2:3312808‑M1/49‑19 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg < 2:1298229‑M1/49‑19 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt < 1:5015509‑M1/49‑20 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa < 1:492250‑M1/50‑23 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 2:3883936‑M1/49‑22 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:1186413‑M1/1‑26 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 2:1083538‑M1/1‑26 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 2:3741730‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg < 2:1550550‑M1/50‑26 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 2:2469863‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGt > 1:3167973/1‑50 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct < 1:2872544‑M1/49‑28 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctca < 2:294311‑M1/50‑30 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 2:111248‑M1/1‑21 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 2:4580756‑M1/1‑20 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttgctcctgtaaaccgctcag < 1:3181613‑M1/48‑31 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagga < 1:641966‑M1/50‑33 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagga < 2:3392909‑M1/50‑33 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:4678968‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:3151120‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 2:2978104‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag < 1:86896‑M1/48‑31 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:4056849‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:3847464‑M1/50‑35 (MQ=255) ttttGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTTTAt > 1:741140/1‑50 (MQ=255) tttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 2:1786907‑M1/1‑15 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagca < 1:2447104‑M1/49‑36 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 2:5359673‑M1/1‑13 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag < 2:2585432‑M1/49‑37 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag < 2:1044408‑M1/49‑37 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:1543008‑M1/1‑12 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt < 2:2396540‑M1/49‑38 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:3227547‑M1/1‑12 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt < 2:2660338‑M1/49‑38 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 2:1248695‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:2330272‑M1/49‑39 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:2813754‑M1/49‑39 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:3950321‑M1/49‑39 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat < 2:3378469‑M1/50‑41 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat < 2:2123203‑M1/50‑41 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat < 1:385986‑M1/50‑41 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat < 1:5069916‑M1/50‑41 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:4777736‑M1/1‑9 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 2:3304276‑M1/1‑9 (MQ=255) aCATTGAAcgtctacacttactcctgtaaactgctcaggagcagtaatg > 2:5180529‑M1/1‑8 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa < 1:4489621‑M1/50‑44 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa > 2:1000835‑M1/1‑7 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa > 2:3143400‑M1/1‑7 (MQ=255) cATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGAt < 2:3382490/50‑1 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat < 2:4562277‑M1/50‑45 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:1719796‑M1/1‑6 (MQ=255) tGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:3695523‑M1/1‑4 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgcatcta > 1:3066037‑M1/1‑3 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:4186182‑M1/50‑50 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:71846‑M1/50‑50 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:2377127‑M1/50‑50 (MQ=255) acgtctacacgtactcctgtaaaccgctcaggagcagtaatgaatctaca < 2:2010441‑M1/50‑50 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |