| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 5 (0.050) | 121 (1.150) | 66/94 | 0.0 | 95.3% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 7 (0.070) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 135 total aligned reads displayed.
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:933335‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 2:3684570‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:265052‑M2/1‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg > 2:49466‑M2/49‑50 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:2399023‑M2/2‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt < 1:3382803‑M2/3‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:2407067‑M2/48‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:237068‑M2/4‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 2:5295419‑M2/46‑49 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 2:4191229‑M2/46‑49 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:5078453‑M2/5‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 2:2132366‑M2/5‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 2:2854578‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 2:3709878‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:613493‑M2/45‑50 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 2:2331504‑M2/7‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:1136743‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:4313861‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:2330259‑M2/8‑1 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 2:2637593‑M2/41‑50 (MQ=255) cTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTacac < 2:1812223/49‑1 (MQ=255) tGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACt > 2:2460505/1‑49 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 2:3730650‑M2/40‑49 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 2:1909329‑M2/40‑49 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:4086182‑M2/40‑49 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:2983180‑M2/12‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:4667120‑M2/12‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 2:4001239‑M2/38‑50 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 2:1556180‑M2/13‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 2:4144502‑M2/38‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 2:2667316‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:660360‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:2662472‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc > 2:4711852‑M2/36‑50 (MQ=255) acaacaGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTc > 2:5180321/1‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 2:4782838‑M2/16‑1 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:1921696‑M2/34‑50 (MQ=255) aacaGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCt > 2:2294852/1‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 2:4165666‑M2/33‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 2:5354761‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 2:1298229‑M2/18‑1 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 1:481840‑M2/18‑1 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 2:3354493‑M2/18‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt < 1:5015509‑M2/19‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt < 2:3706993‑M2/19‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 1:492250‑M2/22‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 2:1299188‑M2/22‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 2:3883936‑M2/21‑1 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:1186413‑M2/27‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 2:1083538‑M2/27‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:453675‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 2:2469863‑M2/26‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc > 1:4150626‑M2/25‑50 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:2864740‑M2/27‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:2872544‑M2/27‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:3145679‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 2:1713019‑M2/29‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 2:294311‑M2/29‑1 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 2:4580756‑M2/21‑50 (MQ=255) agttttgaatacattgaaCGTCTACACTTGCTCCTGTAAACCGCTCAg < 1:3181613‑M2/30‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 1:3151120‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 2:2978104‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 1:4678968‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg < 1:86896‑M2/30‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 2:3392909‑M2/32‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:641966‑M2/32‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:4056849‑M2/34‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:3847464‑M2/34‑1 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 2:1786907‑M2/16‑48 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg < 2:2585432‑M2/36‑1 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg < 2:1044408‑M2/36‑1 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 2:5359673‑M2/14‑49 (MQ=255) tatCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 2:3669146/50‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 2:2396540‑M2/37‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 2:2660338‑M2/37‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:1543008‑M2/13‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:3227547‑M2/13‑49 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 2:1100964‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 2:1248695‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:3950321‑M2/38‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:2330272‑M2/38‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 1:385986‑M2/40‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 1:5069916‑M2/40‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 2:3378469‑M2/40‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 2:3304276‑M2/10‑49 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 2:377030‑M2/10‑49 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:2481867‑M2/41‑1 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACTGCTCAGGAGCAGTAATg > 2:5180529‑M2/9‑49 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 2:3143400‑M2/8‑50 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt < 2:4562277‑M2/44‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:1719796‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 2:4334457‑M2/45‑1 (MQ=255) tgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:3695523‑M2/5‑49 (MQ=255) cAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:2122902/1‑50 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:4186182‑M2/49‑1 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:71846‑M2/49‑1 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:2377127‑M2/49‑1 (MQ=255) aCGTCTACACGTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 2:2010441‑M2/49‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa > 2:2176302/1‑50 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 2:3145687/50‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |