| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1627517 | 8 (0.070) | 135 (1.260) | 68/96 | 0.0 | 93.8% | coding (1/747 nt) | ydfG | 3‑hydroxy acid dehydrogenase |
| ? | NC_000913 | 1652762 = | 10 (0.090) | coding (77/111 nt) | ynfP | protein YnfP | |||||
Only 100 of 149 total aligned reads displayed.
GCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTAC > NC_000913/1627468‑1627566 | gCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA < 2:2170984‑M1/50‑1 (MQ=255)gCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA < 1:4279004‑M1/50‑1 (MQ=255) cATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAa < 2:1099249‑M1/50‑2 (MQ=255) cATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAa < 1:3426837‑M1/50‑2 (MQ=255) aTCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAag > 1:105134‑M1/1‑48 (MQ=255) aTCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAag < 1:562997‑M1/50‑3 (MQ=255) aTCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAag > 1:511972‑M1/1‑48 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcg > 2:2998276‑M1/1‑46 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcg > 1:518830‑M1/1‑46 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcg > 1:2100857‑M1/1‑46 (MQ=255) ccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcg < 1:4486909‑M1/49‑5 (MQ=255) gTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcag > 2:5297965‑M1/1‑43 (MQ=255) gTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcag < 1:2701902‑M1/50‑8 (MQ=255) tGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagt < 1:100519‑M1/50‑9 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgc > 2:2286066‑M1/1‑40 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgc > 2:1933035‑M1/1‑40 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgc > 2:1771017‑M1/1‑40 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgc > 1:4927733‑M1/1‑40 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgc > 1:4115093‑M1/1‑40 (MQ=255) cTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtg < 1:3469209‑M1/49‑10 (MQ=255) tATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcc > 2:4158719‑M1/1‑39 (MQ=255) tATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcc > 2:1511374‑M1/1‑39 (MQ=255) aTGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcc > 1:1876736‑M1/1‑38 (MQ=255) aTGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcc > 1:148689‑M1/1‑38 (MQ=255) tGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgccca < 1:873774‑M1/50‑14 (MQ=255) tGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgccc < 2:10809‑M1/49‑13 (MQ=255) tGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcc > 2:1206797‑M1/1‑37 (MQ=255) tGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTa < 1:773445/48‑1 (MQ=255) tGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAg > 2:2474/1‑49 (MQ=255) gTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccag > 2:433437‑M1/1‑36 (MQ=255) ttATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagc < 2:3190213‑M1/50‑16 (MQ=255) tATTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagc > 2:2363976‑M1/1‑34 (MQ=255) aTTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagcc < 2:1645540‑M1/49‑17 (MQ=255) aTTGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagcc < 1:2442773‑M1/49‑17 (MQ=255) tGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatc > 2:3768907‑M1/1‑31 (MQ=255) tGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatc > 1:5227882‑M1/1‑31 (MQ=255) tGACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatc > 1:2372129‑M1/1‑31 (MQ=255) gACACACAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcc > 2:5114244‑M1/1‑30 (MQ=255) acacacAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatccc < 1:2462776‑M1/50‑22 (MQ=255) acacacAAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcc < 1:4755193‑M1/49‑21 (MQ=255) cacacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatccc > 1:5250853‑M1/1‑28 (MQ=255) acacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccga > 1:4781709‑M1/1‑27 (MQ=255) cacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgat < 2:1437922‑M1/50‑25 (MQ=255) cacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgat < 2:4998294‑M1/50‑25 (MQ=255) cacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgat < 2:3406113‑M1/50‑25 (MQ=255) cacaAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccagcccgat < 2:4872757‑M1/50‑25 (MQ=255) caAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatac < 1:3460760‑M1/50‑27 (MQ=255) caAAAGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatac < 1:3757068‑M1/50‑27 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatact < 2:3670505‑M1/50‑28 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatact < 1:298141‑M1/50‑28 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatact > 1:2142769‑M1/1‑23 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatact < 2:3856409‑M1/50‑28 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatact < 2:3386721‑M1/50‑28 (MQ=255) aaaaGCGTTGAGGAACAGTGAGAagcgcagtacccagccatcccgatact < 2:2993160‑M1/50‑28 (MQ=255) aaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactg > 1:4894121‑M1/1‑22 (MQ=255) aaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactg < 1:146259‑M1/50‑29 (MQ=255) aaaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactg > 1:4192841‑M1/1‑22 (MQ=255) aaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgc < 2:2421283‑M1/50‑30 (MQ=255) aaGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgc > 1:1231455‑M1/1‑21 (MQ=255) aGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgct > 2:1278300‑M1/1‑20 (MQ=255) aGCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgct < 1:3304422‑M1/50‑31 (MQ=255) gCGTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctg < 1:1668039‑M1/50‑32 (MQ=255) gTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgct > 1:132006‑M1/1‑17 (MQ=255) gTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgct > 1:232871‑M1/1‑17 (MQ=255) gTTGAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgct > 1:673706‑M1/1‑17 (MQ=255) ttGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGttt < 1:825219/50‑1 (MQ=255) gAGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgcttt < 1:4399406‑M1/49‑36 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttca < 2:1272466‑M1/50‑38 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttca > 1:2352292‑M1/1‑13 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttca > 2:4469227‑M1/1‑13 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttca < 2:2526722‑M1/50‑38 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttc < 2:929586‑M1/49‑37 (MQ=255) aGGAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttc < 1:777912‑M1/49‑37 (MQ=255) aGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTgg < 1:2914611/50‑1 (MQ=255) ggAACAGTGAGAagcgcagtgcccagccatcccgatactgctgctttcac > 1:2225413‑M1/1‑12 (MQ=255) aaCAGTGAGAagcgcagtgcccagccatcccgatactgctgctttcacca < 1:1834931‑M1/50‑41 (MQ=255) aCAGTGAGAagcgcagtgcccagccatcccgatactgctgctttcacca > 2:3152654‑M1/1‑9 (MQ=255) aCAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGaa > 1:175532/1‑50 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat > 1:1354796‑M1/1‑7 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat < 1:1982234‑M1/50‑44 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat > 1:3915504‑M1/1‑7 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat > 2:756473‑M1/1‑7 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat > 2:28373‑M1/1‑7 (MQ=255) aGTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaat < 2:2620282‑M1/50‑44 (MQ=255) gTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaatc < 2:5238859‑M1/50‑45 (MQ=255) gTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaatc < 1:1173233‑M1/50‑45 (MQ=255) gTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaatc < 2:3828659‑M1/50‑45 (MQ=255) gTGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaatc < 2:4521565‑M1/50‑45 (MQ=255) gTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATg > 2:2289177/1‑49 (MQ=255) tGAGAagcgcagtgcccagccatcccgatactgctgctttcaccaaatcc < 2:1190942‑M1/50‑46 (MQ=255) gagaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcct > 1:2823204‑M1/1‑4 (MQ=255) gagaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcct > 1:103974‑M1/1‑4 (MQ=255) agaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcctt < 1:629782‑M1/50‑48 (MQ=255) agaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcct > 1:161074‑M1/1‑3 (MQ=255) gaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcctta < 2:5323835‑M1/50‑49 (MQ=255) gaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcctta < 1:75126‑M1/50‑49 (MQ=255) gaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcct > 1:3950769‑M1/1‑2 (MQ=255) gaagcgcagtgcccagccatcccgatactgctgctttcaccaaatcct > 1:554385‑M1/1‑2 (MQ=255) aagcgcagtgcccagccatcccgatactgctgctttcaccaaatccttag > 2:4492759‑M1/1‑1 (MQ=255) aagcgcagtgcccagccatcccgatactgctgctttcaccaaatccttag < 2:4196770‑M1/50‑50 (MQ=255) | GCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTAC > NC_000913/1627468‑1627566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |