| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1627517 | 8 (0.070) | 135 (1.260) | 68/96 | 0.0 | 93.8% | coding (1/747 nt) | ydfG | 3‑hydroxy acid dehydrogenase |
| ? | NC_000913 | 1652762 = | 10 (0.090) | coding (77/111 nt) | ynfP | protein YnfP | |||||
Only 100 of 152 total aligned reads displayed.
ATATTTATCAAATAGTTAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAGT > NC_000913/1652713‑1652811 | catcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaa < 1:3426837‑M2/1‑1 (MQ=255)catcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaa < 2:1099249‑M2/1‑1 (MQ=255) atcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAg < 1:518953‑M2/2‑1 (MQ=255) atcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAg < 1:562997‑M2/2‑1 (MQ=255) tcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgc > 1:2202072‑M2/48‑50 (MQ=255) tcccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgc > 2:5277417‑M2/48‑50 (MQ=255) cccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgcg > 1:518830‑M2/47‑50 (MQ=255) cccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgcg > 1:2100857‑M2/47‑50 (MQ=255) cccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgcg > 2:2998276‑M2/47‑50 (MQ=255) ccgtgctatgttattgacacacaaaagcgttgaggaacagtgagaAgcg < 1:4486909‑M2/4‑1 (MQ=255) aTCAAATAGTTAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAg > 2:1340093/1‑50 (MQ=255) tgctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGt < 1:100519‑M2/8‑1 (MQ=255) cAAATAGTTAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTg > 2:1858428/1‑50 (MQ=255) ctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTg < 1:3469209‑M2/9‑1 (MQ=255) ctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGc > 2:2286066‑M2/41‑50 (MQ=255) ctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGc > 1:4927733‑M2/41‑50 (MQ=255) ctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGc > 1:4383683‑M2/41‑50 (MQ=255) ctatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGc > 1:4115093‑M2/41‑50 (MQ=255) aaaTAGTTAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTg < 1:2686261/49‑1 (MQ=255) tatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGcc > 2:4158719‑M2/40‑50 (MQ=255) tatgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGcc > 1:2347920‑M2/40‑50 (MQ=255) atgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGcc > 1:148689‑M2/39‑49 (MQ=255) tgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGccc < 2:10809‑M2/12‑1 (MQ=255) tgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGcc < 1:2438132‑M2/11‑1 (MQ=255) tgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGcc > 2:1206797‑M2/38‑48 (MQ=255) tgttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCa < 1:873774‑M2/13‑1 (MQ=255) ttattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGc < 2:3190213‑M2/15‑1 (MQ=255) ttAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTGCCCAGcc < 2:5160230/50‑1 (MQ=255) tattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGc > 2:2363976‑M2/35‑49 (MQ=255) tattgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGc > 1:3437380‑M2/35‑49 (MQ=255) attgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGcc < 1:2442773‑M2/16‑1 (MQ=255) attgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGcc < 2:1645540‑M2/16‑1 (MQ=255) attgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCa > 1:2891154‑M2/34‑50 (MQ=255) tgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCAt > 2:1592286‑M2/32‑49 (MQ=255) tgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATc > 2:3768907‑M2/32‑50 (MQ=255) tgacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATc > 2:3473650‑M2/32‑50 (MQ=255) acacGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTGCCCAGCCATc > 2:4239804/1‑50 (MQ=255) gacacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATcc > 2:5114244‑M2/31‑50 (MQ=255) cacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATccc > 1:5250853‑M2/29‑49 (MQ=255) cacacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCg < 1:4670443‑M2/22‑1 (MQ=255) gCATGACTCTTGAAATCCATAACTTCATGCGCAGTGCCCAGCCATCCCGa > 2:5057059/1‑50 (MQ=39) acacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGa > 1:4781709‑M2/28‑50 (MQ=255) cacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGAt < 2:4998294‑M2/24‑1 (MQ=255) cacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGAt < 2:3406113‑M2/24‑1 (MQ=255) cacaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGAt < 2:1437922‑M2/24‑1 (MQ=255) acaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATa > 2:730398‑M2/26‑50 (MQ=255) acaaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATa > 1:4845862‑M2/26‑50 (MQ=255) caaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATAc < 1:4942288‑M2/26‑1 (MQ=255) caaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATAc < 1:3757068‑M2/26‑1 (MQ=255) aaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATAct < 1:1837514‑M2/27‑1 (MQ=255) aaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATAct > 2:3306019‑M2/24‑50 (MQ=255) aaaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATAct < 2:3856409‑M2/27‑1 (MQ=255) aaaagcgttgaggaacagtgagaAGCGCAGTACCCAGCCATCCCGATAct < 2:2993160‑M2/27‑1 (MQ=255) aaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActg > 1:4192841‑M2/23‑50 (MQ=255) aaagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActg < 1:146259‑M2/28‑1 (MQ=255) aagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActgc > 1:1231455‑M2/22‑50 (MQ=255) aagcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActgc < 1:5343125‑M2/29‑1 (MQ=255) tctTGAAATCCATAAATTCAAGCGCAGTGCCCAGCCATCCCGATActgct > 2:4062336/1‑50 (MQ=255) agcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActgct > 2:1278300‑M2/21‑50 (MQ=255) gcgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATActgctg < 1:1668039‑M2/31‑1 (MQ=255) cgttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACtgctgc < 2:2439497‑M2/32‑1 (MQ=255) gttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTgctgct > 1:132006‑M2/18‑50 (MQ=255) gttgaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTgctgct > 1:673706‑M2/18‑50 (MQ=255) tgaggaacagtgagaAGCGAAGTGCCCAGCCATCCCGATACTGCTGCttt > 1:593748‑M2/16‑50 (MQ=255) gaggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCttt > 1:2469692‑M2/15‑49 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTc < 2:929586‑M2/36‑1 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTc < 1:777912‑M2/36‑1 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCa > 1:2352292‑M2/14‑50 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCa > 2:4469227‑M2/14‑50 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCa < 2:1272466‑M2/37‑1 (MQ=255) aggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCa < 2:2526722‑M2/37‑1 (MQ=255) ggaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCAc > 1:2225413‑M2/13‑50 (MQ=255) gaacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCAcc < 2:2262714‑M2/39‑1 (MQ=255) aacagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCa < 1:1834931‑M2/40‑1 (MQ=255) cagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCaaa < 2:4676550‑M2/42‑1 (MQ=255) cagtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCaaa < 2:4473510‑M2/42‑1 (MQ=255) agtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt < 2:2620282‑M2/43‑1 (MQ=255) agtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt > 2:28373‑M2/8‑50 (MQ=255) agtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt > 1:1354796‑M2/8‑50 (MQ=255) agtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt < 1:1982234‑M2/43‑1 (MQ=255) agtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt > 1:3915504‑M2/8‑50 (MQ=255) aaaTTCAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAt > 2:3114236/1‑50 (MQ=255) gtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATc < 2:5238859‑M2/44‑1 (MQ=255) gtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATc < 1:1173233‑M2/44‑1 (MQ=255) gtgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATc < 2:4521565‑M2/44‑1 (MQ=255) tgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATcc > 1:3203554‑M2/6‑50 (MQ=255) tgagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATcc < 2:1190942‑M2/45‑1 (MQ=255) aTTCAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATcc > 1:3470649/1‑50 (MQ=255) gagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCt > 1:2823204‑M2/5‑50 (MQ=255) gagaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCt > 1:103974‑M2/5‑50 (MQ=255) agaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCt > 2:3788735‑M2/4‑49 (MQ=255) agaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCt > 1:161074‑M2/4‑49 (MQ=255) gaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCt > 1:3950769‑M2/3‑48 (MQ=255) gaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTa < 1:75126‑M2/48‑1 (MQ=255) gaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTa < 2:5323835‑M2/48‑1 (MQ=255) gaAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTa < 2:177386‑M2/48‑1 (MQ=255) aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAg > 2:4285081‑M2/2‑50 (MQ=255) aGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAGt < 2:2323170/50‑1 (MQ=255) aGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAGt > 2:3875199/1‑50 (MQ=255) aGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAGt > 1:888334/1‑50 (MQ=255) | ATATTTATCAAATAGTTAACACGCATGACTCTTGAAATCCATAAATTCAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTAGT > NC_000913/1652713‑1652811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |