| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 10 (0.090) | 107 (0.980) | 61/98 | 0.0 | 90.3% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 13 (0.120) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 120 total aligned reads displayed.
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 | ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat > 1:1092142/1‑50 (MQ=255)ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat > 2:4949848/1‑50 (MQ=255)ataatTCAAATTGGTCCGATCCGGCGCAACATCCCAATGGCCTGGATtat > 1:3087926/1‑50 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:4341247‑M1/1‑49 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 2:2249213‑M1/1‑49 (MQ=255) tAATTCAAATTGGTCCGATCCGGCGCAACGGGCCAATGGCCTAGATTATt < 2:27616‑M1/50‑2 (MQ=255) aatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtata > 1:4705564/1‑49 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:4526357‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 2:2640791‑M1/1‑48 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 2:448508‑M1/50‑4 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:1717828‑M1/50‑4 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:4759674‑M1/1‑47 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:5362148‑M1/1‑47 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac > 1:3716975‑M1/1‑46 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 1:3337318‑M1/49‑6 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 2:1601487‑M1/49‑6 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 2:1033602‑M1/49‑6 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccga < 1:1665075‑M1/50‑8 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg > 2:3719825‑M1/1‑43 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg > 2:2864922‑M1/1‑43 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:3468748‑M1/1‑42 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat < 2:3177110‑M1/50‑10 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:1122813‑M1/1‑41 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 2:10001‑M1/50‑11 (MQ=255) tGGTCCGTTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 2:4312359‑M1/1‑39 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 2:2549827‑M1/1‑38 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:1377455‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 2:1548215‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 2:3276687‑M1/49‑12 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:2071366‑M1/49‑12 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgg < 2:1753602‑M1/50‑14 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTAt < 2:3998033/49‑1 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATc < 2:4483756/50‑1 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga < 1:3388878‑M1/50‑15 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:1383506‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 2:5311834‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCtt < 1:317797/49‑1 (MQ=255) gATCCGGCGCATCGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 2:4391743‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca < 1:697218‑M1/50‑18 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 2:5331755‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:5262480‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca < 2:3143570‑M1/50‑18 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:1026922‑M1/1‑33 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca < 1:1025748‑M1/50‑18 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 2:4730933‑M1/50‑19 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:3699967‑M1/50‑19 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:4823971‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:2445868‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:3248843‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 2:2465359‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:4431131‑M1/1‑32 (MQ=255) tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca < 1:3430359‑M1/50‑20 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 2:2435204‑M1/1‑29 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 2:117314‑M1/1‑29 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTg > 2:4068612/1‑49 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGc < 2:1084834/50‑1 (MQ=255) cGGCGCAACGTCCCAAGGGCCTGGATTATtgaccgaatgcggaccacatt < 2:1305539‑M1/50‑22 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:1729002‑M1/1‑28 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca < 1:2403169‑M1/50‑24 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcac < 1:45016‑M1/50‑25 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca > 2:2122769‑M1/1‑26 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca > 1:2382579‑M1/1‑25 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 2:108103‑M1/1‑24 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 1:1691668‑M1/1‑23 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca < 1:2100542‑M1/50‑29 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat < 1:535539‑M1/50‑30 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt > 1:2275942‑M1/1‑20 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt > 1:2605286‑M1/1‑20 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt < 1:3320893‑M1/50‑32 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt > 2:2729055‑M1/1‑19 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 2:599416‑M1/1‑17 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct < 1:2840687‑M1/50‑34 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctt < 2:4308410‑M1/50‑35 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 2:5145744‑M1/1‑16 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:4503357‑M1/50‑36 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:1567254‑M1/50‑36 (MQ=255) aaTGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGcc < 2:1583856/50‑1 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg > 1:4080918‑M1/1‑13 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg > 2:1228513‑M1/1‑13 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 2:143427‑M1/50‑38 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 2:5158029‑M1/50‑38 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg > 2:3046435‑M1/1‑11 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg > 1:4984722‑M1/1‑11 (MQ=255) gCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTg < 1:5182635/49‑1 (MQ=255) gCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTg < 2:2179947/49‑1 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:4604110‑M1/50‑41 (MQ=255) ggATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTta > 2:1226564/1‑49 (MQ=255) ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 2:2283918‑M1/1‑4 (MQ=255) ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:4310852‑M1/1‑4 (MQ=255) tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 2:4713525‑M1/1‑3 (MQ=255) tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 2:4155959‑M1/1‑3 (MQ=255) tattgaccgaatgccgaccacattcacatcatttcttacgcgcgtattt > 2:1208946‑M1/1‑3 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:1814336‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 2:3480145‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:1231854‑M1/1‑2 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag < 2:2509995‑M1/50‑50 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag > 1:3737057‑M1/1‑1 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag > 1:3317975‑M1/1‑1 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca < 1:2816408‑M1/49‑49 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca < 2:22056‑M1/49‑49 (MQ=255) | ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204300‑2204398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |