| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 10 (0.090) | 107 (0.980) | 61/98 | 0.0 | 90.3% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 13 (0.120) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 120 total aligned reads displayed.
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236669‑2236766 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:4341247‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 2:1840711‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 2:2249213‑M2/50‑50 (MQ=255)ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTAt < 2:4942059/50‑1 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:4526357‑M2/49‑49 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 2:2640791‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:4759674‑M2/48‑50 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:5362148‑M2/48‑50 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 2:448508‑M2/3‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:3716975‑M2/47‑50 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 2:1033602‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 2:1601487‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:3337318‑M2/5‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 2:3719825‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 2:2864922‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:1707055‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGa < 1:1665075‑M2/7‑1 (MQ=255) cGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGaa > 2:3109235/1‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:1122813‑M2/42‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 2:10001‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 2:4478733‑M2/41‑50 (MQ=255) tggtccgttccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 2:4312359‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 2:1548215‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:2071366‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 2:3276687‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 2:2549827‑M2/39‑50 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCgg < 2:1753602‑M2/13‑1 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg < 2:3157323‑M2/12‑1 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:4936930‑M2/38‑49 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:3388878‑M2/14‑1 (MQ=255) cAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCgg < 2:5288719/48‑1 (MQ=255) cAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGAc < 1:3539862/50‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 2:5311834‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:1383506‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:1263696‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc < 2:897168‑M2/15‑1 (MQ=255) gatccggcgcatcgtcccaatggcctggattatTGACCGAATGCGGACca > 2:4391743‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 2:4049803‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:697218‑M2/17‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 2:5331755‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:5262480‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:1026922‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 2:3143570‑M2/17‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:1025748‑M2/17‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:3699967‑M2/18‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:3248843‑M2/33‑49 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:2445868‑M2/33‑49 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:4431131‑M2/33‑49 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:3430359‑M2/19‑1 (MQ=255) ccACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACAt > 1:1840371/1‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 2:117314‑M2/30‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 2:2435204‑M2/30‑50 (MQ=255) cggcgcaacgtcccaagggcctggattatTGACCGAATGCGGACCACAtt < 2:1305539‑M2/21‑1 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:1729002‑M2/29‑49 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca < 1:2403169‑M2/23‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:45016‑M2/24‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca > 1:2382579‑M2/26‑50 (MQ=255) caGATCATGATGTTATGTGCGTTTATGACCGAATGCGGGCCACATTcaca < 2:4884854/50‑1 (MQ=255) aGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCAcat < 2:5094589/50‑1 (MQ=255) gATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCAcatc < 1:680993/50‑1 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:1691668‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:2100542‑M2/28‑1 (MQ=255) tCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCAcatcat < 1:4533393/50‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:535539‑M2/29‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 2:5120508‑M2/22‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 2:2373662‑M2/29‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:2275942‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:3292495‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:2605286‑M2/21‑50 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:3320893‑M2/31‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt > 2:2729055‑M2/20‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:2840687‑M2/33‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:3465075‑M2/18‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 2:599416‑M2/18‑50 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 2:5145744‑M2/17‑49 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:4503357‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:1567254‑M2/35‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 1:4080918‑M2/14‑50 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 2:1228513‑M2/14‑50 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 2:143427‑M2/37‑1 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg > 1:4984722‑M2/12‑50 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg > 2:3046435‑M2/12‑50 (MQ=255) tgtgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:850279/50‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:4604110‑M2/40‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 2:2686148‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 2:2283918‑M2/5‑50 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 2:114589‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:4310852‑M2/5‑50 (MQ=255) ttATGACCGAATGCGGACCACATTCCCATCATTTCTTACGCGCGTAttt > 1:46296/1‑49 (MQ=255) ttATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:283959/1‑49 (MQ=255) tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 2:4155959‑M2/4‑49 (MQ=255) tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 2:4713525‑M2/4‑49 (MQ=255) tatTGACCGAATGCCGACCACATTCACATCATTTCTTACGCGCGTAttt > 2:1208946‑M2/4‑49 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:1231854‑M2/3‑48 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 1:1814336‑M2/47‑1 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 2:3480145‑M2/47‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 2:22056‑M2/48‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:2816408‑M2/48‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAg > 1:3737057‑M2/2‑50 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAg < 2:2509995‑M2/49‑1 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236669‑2236766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |