| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 13 (0.120) | 146 (1.330) | 67/98 | 0.0 | 94.2% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 5 (0.050) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 161 total aligned reads displayed.
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 2:5184467/50‑1 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 2:908115‑M1/1‑49 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 2:1443767‑M1/1‑49 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg < 1:4523391‑M1/49‑3 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 2:4456049‑M1/48‑2 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:3450344‑M1/1‑46 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATg < 1:1603419/49‑1 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:2996150‑M1/50‑6 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 2:4246859‑M1/1‑44 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAAc > 2:275959/1‑50 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:4516877‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 2:176922‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:1467430‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 2:3890494‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAAcc > 1:1654705/1‑50 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:3296341‑M1/50‑9 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:1449531‑M1/1‑42 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 2:2359080‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 2:2187391‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 2:4180240‑M1/1‑41 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 2:2540126‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:745229‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:299904‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 2:1132238‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 2:4817653‑M1/49‑12 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 2:3856297‑M1/1‑37 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:963481‑M1/1‑37 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:3163585‑M1/1‑37 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 2:4001990‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:105625‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTtgt > 2:514125/1‑50 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:3364974‑M1/1‑35 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 2:3801426‑M1/1‑35 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:2923106‑M1/1‑35 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:2188145‑M1/50‑17 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 2:1310826‑M1/50‑18 (MQ=255) gCACTGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTgtggtg > 2:2173613/1‑50 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:1755418‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 2:2410608‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 2:965694‑M1/1‑30 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 2:2346836‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:1175767‑M1/1‑28 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 2:1559518‑M1/1‑27 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 2:3008681‑M1/1‑27 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:1639101‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 2:5303764‑M1/1‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:4563433‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 2:4635424‑M1/49‑26 (MQ=255) cATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCa > 1:4740454/1‑50 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:3080384‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat < 2:2025381‑M1/50‑29 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 2:3021544‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:1164196‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:1395082‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCAc < 1:1671182/50‑1 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt < 2:1845201‑M1/50‑30 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:1801305‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 2:2603389‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:1315906‑M1/1‑20 (MQ=255) tCATTTTCAAGGCGCCGACcgaaacagttcgtcgggctgaagattattct > 2:3381359‑M1/1‑19 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct > 1:1294195‑M1/1‑19 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 2:2310255‑M1/49‑31 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 2:5356952‑M1/1‑17 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:1045758‑M1/50‑35 (MQ=255) tttCAAGGAGCCGACcgaaccagttcgtcgggctgaagattattcttgcg > 1:3033614‑M1/1‑15 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 2:4122900‑M1/1‑15 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 2:519762‑M1/1‑15 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:2101375‑M1/49‑37 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:3525446‑M1/1‑13 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:3976019‑M1/49‑37 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:2163285‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 2:4536341‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:2815053‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcg < 2:1216574‑M1/49‑38 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:3569668‑M1/1‑11 (MQ=255) aGGTGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:4296059‑M1/50‑41 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 2:4195127‑M1/50‑41 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:3282781‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 2:3507282‑M1/50‑41 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:977237‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt > 2:879742‑M1/1‑9 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:1937520‑M1/50‑42 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 2:2693204‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 2:429125‑M1/1‑7 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc < 2:250892‑M1/50‑44 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:418759‑M1/1‑7 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca < 2:3622826‑M1/50‑47 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:2445573‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:3564227‑M1/50‑48 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 2:3716194‑M1/1‑3 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 2:662445‑M1/1‑3 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:818292‑M1/50‑48 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:2768516‑M1/50‑48 (MQ=255) gACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTaa > 2:4782745/1‑50 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:4125549‑M1/50‑49 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 2:3047791‑M1/50‑49 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 2:3097791‑M1/1‑2 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:4605827‑M1/50‑50 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:4089968‑M1/50‑50 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:3761853‑M1/1‑1 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |