| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 13 (0.120) | 146 (1.330) | 67/98 | 0.0 | 94.2% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 5 (0.050) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 153 total aligned reads displayed.
TGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614747‑2614845 | tttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 2:1443767‑M2/50‑50 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg < 1:4523391‑M2/2‑1 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:4097420‑M2/48‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc < 2:4456049‑M2/1‑1 (MQ=255) tgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa < 1:2996150‑M2/5‑1 (MQ=255) gcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 2:4246859‑M2/45‑49 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 1:683686‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 1:1467430‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:4516877‑M2/7‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 2:176922‑M2/7‑1 (MQ=255) aatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAg < 1:4031413‑M2/8‑1 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 2:2187391‑M2/42‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 2:4180240‑M2/42‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 2:490539‑M2/42‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt < 2:2540126‑M2/10‑1 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:745229‑M2/40‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg > 2:2220620‑M2/39‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 1:3169527‑M2/11‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 1:1419861‑M2/11‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 2:4817653‑M2/11‑1 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 2:3856297‑M2/38‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:963481‑M2/38‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:311999‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:105625‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 2:4001990‑M2/37‑50 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg > 2:3801426‑M2/36‑50 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg > 1:3364974‑M2/36‑50 (MQ=255) tttaCGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCggg < 1:3143798/49‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 2:138972‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 2:2410608‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 2:965694‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:1755418‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:160618‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 2:631393‑M2/20‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 2:5279365‑M2/20‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 2:4070293‑M2/20‑1 (MQ=255) atgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:914886‑M2/30‑49 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:1175767‑M2/29‑48 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGaa < 2:2346836‑M2/22‑1 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGaa < 2:3409042‑M2/22‑1 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 2:3008681‑M2/28‑47 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAg < 1:1639101‑M2/23‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGa < 1:2936442‑M2/24‑1 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:4563433‑M2/25‑49 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat < 2:4635424‑M2/25‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 1:1395082‑M2/23‑50 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 1:1164196‑M2/23‑50 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat < 2:2025381‑M2/28‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta < 2:2961592‑M2/27‑1 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt < 2:1845201‑M2/29‑1 (MQ=255) ctcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 2:4147565‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 2:2381984‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 2:2603389‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:1801305‑M2/21‑50 (MQ=255) aCCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:3652942/1‑50 (MQ=255) tcattttcaaggcgccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt > 2:3381359‑M2/20‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt > 1:1294195‑M2/20‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt > 2:1150562‑M2/20‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:3531079‑M2/18‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 2:5356952‑M2/18‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc < 1:1045758‑M2/34‑1 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc < 1:2402636‑M2/34‑1 (MQ=255) tttcaaggagccgacCGAACCAGTTCGTCGGGCTGAAGATTATTCTTgcg > 1:3033614‑M2/16‑50 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 2:231091‑M2/16‑50 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 2:519762‑M2/16‑50 (MQ=255) tcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcgc < 1:2101375‑M2/36‑1 (MQ=255) tcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcgc > 1:3525446‑M2/14‑49 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg < 2:1216574‑M2/37‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 1:2163285‑M2/13‑50 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 1:2815053‑M2/13‑50 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 2:4536341‑M2/13‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 1:3569668‑M2/12‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 2:711497‑M2/12‑50 (MQ=255) aggtgccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt < 1:4296059‑M2/40‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 1:3282781‑M2/11‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 1:3353109‑M2/10‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt < 1:1937520‑M2/41‑1 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 2:879742‑M2/10‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 2:3864968‑M2/10‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt < 2:1668961‑M2/41‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 2:250892‑M2/43‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc > 2:429125‑M2/8‑50 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc < 2:1121254‑M2/44‑1 (MQ=255) ccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc > 1:4270639‑M2/6‑49 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa < 2:3622826‑M2/46‑1 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa > 1:2445573‑M2/5‑50 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa < 1:300304‑M2/46‑1 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt > 2:3716194‑M2/4‑50 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:2768516‑M2/47‑1 (MQ=255) cGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:4001172/50‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:4125549‑M2/48‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 2:3047791‑M2/48‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc > 2:3097791‑M2/3‑50 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTCGCGCGATTTGCCCATc < 1:1304772‑M2/48‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:4605827‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 2:4510863‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg > 1:3761853‑M2/2‑50 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg > 2:4219034‑M2/2‑50 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg > 2:3525589/1‑50 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg < 1:1479073/50‑1 (MQ=255) | TGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614747‑2614845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |