| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 13 (0.120) | 164 (1.530) | 80/96 | 0.0 | 92.2% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 15 (0.140) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 183 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 | cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 2:2565622‑M1/50‑1 (MQ=255)cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT > 1:417688‑M1/1‑50 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:3484502‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 2:2905018‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:3965318‑M1/1‑49 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:822624‑M1/1‑48 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:5113263‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 2:5292198‑M1/1‑48 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:3323846‑M1/1‑47 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:4315678‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 2:198593‑M1/49‑5 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:177066‑M1/49‑5 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:2679755‑M1/1‑44 (MQ=255) gATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 2:3819812‑M1/1‑43 (MQ=255) gATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:284830‑M1/1‑43 (MQ=255) gATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 2:2544780‑M1/1‑43 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 2:582927‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 2:2386290‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 2:2854751‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:4939781‑M1/49‑8 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:75497‑M1/50‑10 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:5252265‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 2:1707676‑M1/1‑39 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:4166841‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 2:3579408‑M1/1‑39 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:650869‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 2:4908575‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 2:1759922‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 2:1453575‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 2:2955518‑M1/1‑38 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 2:2186546‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:3330880‑M1/49‑12 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 2:4707347‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:4538530‑M1/50‑14 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 2:3212943‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:4469749‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:2504123‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATc > 1:1618908/1‑50 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:2990858‑M1/1‑35 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac < 1:1683129‑M1/50‑16 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 2:4534754‑M1/50‑17 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:3695082‑M1/1‑33 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa < 1:3897075‑M1/50‑19 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaa < 1:4267931‑M1/50‑20 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 2:698941‑M1/1‑31 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 2:4429355‑M1/1‑30 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 2:4268039‑M1/1‑29 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:1979347‑M1/50‑22 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 1:1726232‑M1/1‑29 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:4996547‑M1/50‑22 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 2:5045981‑M1/50‑22 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTa > 2:5091057/1‑49 (MQ=255) cGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacg > 2:2039437‑M1/1‑28 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:2739896‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:1274341‑M1/1‑27 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACaa < 1:1198244/50‑1 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 2:2845211‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:2862815‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 2:1153443‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:2897896‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:1793637‑M1/1‑25 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcc < 2:4741447‑M1/50‑27 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatccaaacactaaaacgggcca > 2:4993001‑M1/1‑23 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat < 1:3500910‑M1/50‑29 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 2:1653749‑M1/49‑28 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 1:4762399‑M1/49‑28 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatc < 1:2344394‑M1/50‑30 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:4191519‑M1/1‑21 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 2:4945055‑M1/1‑20 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag < 1:3761872‑M1/49‑32 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 2:1103116‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 2:4792247‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:3201644‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:1047312‑M1/48‑31 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc > 2:1929549‑M1/1‑17 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg < 2:3989476‑M1/49‑33 (MQ=255) acaTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCa < 2:847503/49‑1 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc < 1:716933‑M1/50‑35 (MQ=255) caTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCaa > 1:4902567/1‑49 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:2634170‑M1/1‑15 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 2:3899558‑M1/1‑15 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:4008095‑M1/1‑15 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg < 2:1002885‑M1/50‑37 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg > 1:4205732‑M1/1‑14 (MQ=255) aaTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 2:3257268‑M1/1‑13 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:5290962‑M1/50‑39 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt < 2:3692141‑M1/49‑38 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:1300886‑M1/49‑41 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:4627737‑M1/49‑41 (MQ=255) cTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTAt > 2:3529313/1‑49 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatc < 1:285479‑M1/49‑44 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatc < 1:4351417‑M1/49‑44 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:5146065‑M1/1‑6 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag < 2:1542474‑M1/50‑46 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:1017242‑M1/1‑3 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 2:3412557‑M1/1‑2 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 1:2373109‑M1/1‑2 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg < 1:3872871‑M1/49‑48 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg < 2:3378414‑M1/49‑48 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct > 2:3827396‑M1/1‑1 (MQ=255) | CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |