| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3581138 | 19 (0.170) | 117 (1.220) +CAAATG |
60/86 | 0.0 | 88.1% | coding (1/489 nt) | yhhY | N‑acetyltransferase YhhY |
| ? | NC_000913 | 3585054 = | 17 (0.160) | intergenic (+11/+27) | yrhB/ggt | putative heat shock chaperone/glutathione hydrolase proenzyme | |||||
Only 100 of 160 total aligned reads displayed.
GAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCAT > NC_000913/3581089‑3581187 | gAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGaa > 2:2907351/1‑50 (MQ=255)gAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGaa > 2:1454386/1‑50 (MQ=255)gAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGaa > 1:460913/1‑50 (MQ=255) aaaGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGaa < 2:1607022/49‑1 (MQ=255) aaaGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGaa > 1:4463661/1‑49 (MQ=255) aaaGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAc < 1:3690392‑M1/50‑2 (MQ=255) aaGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtg < 1:1615888/50‑1 (MQ=255) aGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGGCAAAGGAAcaa < 1:1228120‑M1/50‑4 (MQ=255) aGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAt > 2:3210606/1‑48 (MQ=255) gTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaa < 2:1206808‑M1/50‑5 (MQ=255) gTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaa > 2:5252214‑M1/1‑46 (MQ=255) gTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaa < 2:2664694‑M1/50‑5 (MQ=255) gTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaa < 1:3925709‑M1/50‑5 (MQ=255) tCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaat < 1:600329‑M1/50‑6 (MQ=255) tCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaat < 1:4725416‑M1/50‑6 (MQ=255) cAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatg > 2:195599‑M1/1‑44 (MQ=255) cAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatg > 1:2938259‑M1/1‑44 (MQ=255) cAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatg > 2:4787563‑M1/1‑44 (MQ=255) aaTGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgc > 2:4670996‑M1/1‑43 (MQ=255) atgatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgct < 2:2330652‑M1/50‑9 (MQ=255) atgatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgct > 1:186957‑M1/1‑42 (MQ=255) atgatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgct > 1:3085558‑M1/1‑42 (MQ=255) atgatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgct > 2:4096549‑M1/1‑42 (MQ=255) atgatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgct < 2:4274961‑M1/50‑9 (MQ=255) gatgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctct > 1:2001979‑M1/1‑40 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctctt > 1:513738‑M1/1‑39 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctctt < 1:3391767‑M1/50‑12 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctctt > 2:4849202‑M1/1‑39 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctctt < 2:5056716‑M1/50‑12 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctct < 1:4003821‑M1/49‑11 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctct < 1:3344416‑M1/49‑11 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctct < 1:1343284‑M1/49‑11 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctct < 1:910741‑M1/49‑11 (MQ=255) atgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGAt < 1:2500911/49‑1 (MQ=255) tgTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAg < 2:2225698/50‑1 (MQ=255) gTTGAACTGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcc > 2:923460‑M1/1‑37 (MQ=255) tGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttccca > 1:3674787‑M1/1‑35 (MQ=255) tGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttccca > 2:4951152‑M1/1‑35 (MQ=255) tGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttccca > 1:1417957‑M1/1‑35 (MQ=255) tGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTaa > 1:2209893/1‑50 (MQ=255) gAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttccca < 1:5162361‑M1/49‑16 (MQ=255) gAAAGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttccca < 1:2326344‑M1/49‑16 (MQ=255) aaaGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccac > 2:372114‑M1/1‑33 (MQ=255) aGGGACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacg > 2:3916988‑M1/1‑31 (MQ=255) gggACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaag < 1:396050‑M1/50‑21 (MQ=255) ggACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaaga < 1:2450841‑M1/50‑22 (MQ=255) ggACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaaga < 1:1546469‑M1/50‑22 (MQ=255) gACATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagag > 2:448691‑M1/1‑28 (MQ=255) aCATTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagg < 2:1275920‑M1/50‑24 (MQ=255) aCATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCAc < 2:1836270/50‑1 (MQ=255) aTTTACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggc > 1:4574002‑M1/1‑25 (MQ=255) tttACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggcc < 1:4999203‑M1/50‑27 (MQ=255) tttACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACg > 1:1282615/1‑48 (MQ=255) ttACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccg > 1:1267109‑M1/1‑23 (MQ=255) ttACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccg > 2:2663117‑M1/1‑23 (MQ=255) tACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgc > 1:1823512‑M1/1‑22 (MQ=255) tACCCCAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccg < 2:3968192‑M1/49‑28 (MQ=255) tACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAg < 1:4970598/49‑1 (MQ=255) ccccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgcta < 2:369110‑M1/50‑31 (MQ=255) ccccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgcta < 2:3036133‑M1/50‑31 (MQ=255) ccccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgct > 1:4380674‑M1/1‑20 (MQ=255) ccccAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGaaa > 2:1354377/1‑50 (MQ=255) cccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaa < 2:2023069‑M1/50‑32 (MQ=255) ccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaac < 1:2291219‑M1/50‑33 (MQ=255) ccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaac > 2:5298947‑M1/1‑18 (MQ=255) ccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaac < 1:2752444‑M1/50‑33 (MQ=255) ccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaac > 2:4310544‑M1/1‑18 (MQ=255) ccAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaac > 1:449916‑M1/1‑18 (MQ=255) cAAAGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacc > 1:506213‑M1/1‑17 (MQ=255) aaaGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacct < 2:3275784‑M1/50‑35 (MQ=255) aaGAGGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacctt < 2:1652404‑M1/50‑36 (MQ=255) agagGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacct > 2:3616381‑M1/1‑14 (MQ=255) agagGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacct > 2:105948‑M1/1‑14 (MQ=255) agagGACAAAGGAAcaaatgctcttcccacgaagagggccgctaacct > 1:5353757‑M1/1‑14 (MQ=255) agGACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagt < 1:3515364‑M1/50‑39 (MQ=255) ggACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagta < 2:2720890‑M1/50‑40 (MQ=255) ggACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagta > 2:4609596‑M1/1‑11 (MQ=255) ggACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagta < 1:1178954‑M1/50‑40 (MQ=255) ggACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagta < 2:1998461‑M1/50‑40 (MQ=255) ggACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagta < 1:4180668‑M1/50‑40 (MQ=255) gACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtac > 1:59015‑M1/1‑10 (MQ=255) gACAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtac < 1:3017730‑M1/50‑41 (MQ=255) aCAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtacc < 2:3832035‑M1/50‑42 (MQ=255) cAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccc < 2:5153465‑M1/50‑43 (MQ=255) cAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccc > 1:4865703‑M1/1‑8 (MQ=255) cAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccc > 1:921890‑M1/1‑8 (MQ=255) cAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccc < 2:4557646‑M1/50‑43 (MQ=255) cAAAGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccc > 2:848316‑M1/1‑8 (MQ=255) aaaGGAAcaaatgctcttcccacgaagagggccgctaaccttagtacccc < 2:2744215‑M1/50‑44 (MQ=255) aaaGGAAcaaatgctcttcccacgaagagggccgctaaccttagtacccc > 2:4649987‑M1/1‑7 (MQ=255) aaGGAAcaaatgctcttcccacgaagagggccgctaaccttagtaccccg > 2:555164‑M1/1‑6 (MQ=255) aGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAgg > 2:4134243/1‑50 (MQ=255) aGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAgg > 2:2222553/1‑50 (MQ=255) ggAAcaaatgctcttcccacgaagagggccgctaaccttagtaccccgcc > 2:136505‑M1/1‑4 (MQ=255) ggAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGc < 1:2470453/50‑1 (MQ=255) gAAcaaatgctcttcccacgaagagggccgctaaccttagtaccccgccg > 2:327732‑M1/1‑3 (MQ=255) gAAcaaatgctcttcccacgaagagggccgctaaccttagtaccccgccg > 1:1414436‑M1/1‑3 (MQ=255) gAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGc > 1:4831747/1‑49 (MQ=255) aacaaatgctcttcccacgaagatggccgctaaccttagtaccccgccgt > 2:1799217‑M1/1‑2 (MQ=255) aacaaatgctcttcccacgaagagggccgctaaccttagtaccccgccgt > 2:4647098‑M1/1‑2 (MQ=255) | GAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCAT > NC_000913/3581089‑3581187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |