| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3581138 | 19 (0.170) | 117 (1.220) +CAAATG |
60/86 | 0.0 | 88.1% | coding (1/489 nt) | yhhY | N‑acetyltransferase YhhY |
| ? | NC_000913 | 3585054 = | 17 (0.160) | intergenic (+11/+27) | yrhB/ggt | putative heat shock chaperone/glutathione hydrolase proenzyme | |||||
Only 100 of 146 total aligned reads displayed.
GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCAT > NC_000913/3585005‑3585103 | aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc < 2:895708‑M2/1‑1 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct > 2:4096549‑M2/49‑50 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct < 2:4274961‑M2/2‑1 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct > 1:230948‑M2/49‑50 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct > 1:3085558‑M2/49‑50 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct < 2:2330652‑M2/2‑1 (MQ=255) atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct > 1:186957‑M2/49‑50 (MQ=255) ttACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCctc < 1:3769386/50‑1 (MQ=255) tgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctc > 1:5357640‑M2/48‑50 (MQ=255) gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct > 1:2001979‑M2/47‑50 (MQ=255) atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct < 1:3344416‑M2/4‑1 (MQ=255) atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt > 2:4849202‑M2/46‑50 (MQ=255) atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt < 1:3391767‑M2/5‑1 (MQ=255) atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt < 2:5056716‑M2/5‑1 (MQ=255) tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc < 1:4990343‑M2/6‑1 (MQ=255) tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc < 1:4875799‑M2/6‑1 (MQ=255) gttgaactggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc > 2:923460‑M2/44‑50 (MQ=255) ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc > 1:2418105‑M2/43‑49 (MQ=255) ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc < 1:5212027‑M2/7‑1 (MQ=255) ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc < 1:1482482‑M2/7‑1 (MQ=255) ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc > 1:1365728‑M2/43‑49 (MQ=255) tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa > 2:4951152‑M2/42‑50 (MQ=255) aaTAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCa > 1:2906199/1‑50 (MQ=255) aaTAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCGCTTCCCa < 2:2273617/50‑1 (MQ=255) gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa < 1:2326344‑M2/9‑1 (MQ=255) gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa < 1:5162361‑M2/9‑1 (MQ=255) gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa < 2:3789710‑M2/9‑1 (MQ=255) aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg < 2:1998276‑M2/11‑1 (MQ=255) agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg > 2:3916988‑M2/38‑48 (MQ=255) gggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAag < 1:396050‑M2/14‑1 (MQ=255) ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga < 1:1546469‑M2/15‑1 (MQ=255) ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga < 2:2280730‑M2/15‑1 (MQ=255) ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga < 1:2450841‑M2/15‑1 (MQ=255) acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg < 1:3788212‑M2/17‑1 (MQ=255) acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg < 2:3397430‑M2/17‑1 (MQ=255) ggCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAggg < 1:4451585/50‑1 (MQ=255) atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc > 2:4652326‑M2/32‑50 (MQ=255) atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc > 1:4574002‑M2/32‑50 (MQ=255) agttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc < 2:3952895‑M2/19‑1 (MQ=255) tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc < 2:2490158‑M2/20‑1 (MQ=255) ttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg > 2:2663117‑M2/30‑50 (MQ=255) taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg < 1:2938760‑M2/21‑1 (MQ=255) taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc > 1:1823512‑M2/29‑50 (MQ=255) ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCt > 1:4380674‑M2/27‑49 (MQ=255) ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTa < 2:369110‑M2/24‑1 (MQ=255) ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTa < 2:3036133‑M2/24‑1 (MQ=255) cTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCt > 1:3881749/1‑49 (MQ=255) cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa > 1:1688381‑M2/26‑50 (MQ=255) cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa < 2:5172924‑M2/25‑1 (MQ=255) ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc > 2:4310544‑M2/25‑50 (MQ=255) ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc < 1:2752444‑M2/26‑1 (MQ=255) caaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAcc < 1:841875‑M2/27‑1 (MQ=255) caaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAcc > 1:506213‑M2/24‑50 (MQ=255) aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt < 2:3275784‑M2/28‑1 (MQ=255) aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt < 1:1335982‑M2/28‑1 (MQ=255) agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt > 2:3616381‑M2/21‑48 (MQ=255) agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt > 2:105948‑M2/21‑48 (MQ=255) agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt > 2:5361776‑M2/21‑48 (MQ=255) agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa < 1:2068242‑M2/30‑1 (MQ=255) ttGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAg > 1:3371362/1‑50 (MQ=255) aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg > 2:1752043‑M2/19‑49 (MQ=255) aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg > 2:1105114‑M2/19‑49 (MQ=255) aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt < 1:3515364‑M2/32‑1 (MQ=255) ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa < 2:1998461‑M2/33‑1 (MQ=255) ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa > 2:4609596‑M2/18‑50 (MQ=255) ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa < 1:1178954‑M2/33‑1 (MQ=255) ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa > 1:4163959‑M2/18‑50 (MQ=255) ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa < 1:4180668‑M2/33‑1 (MQ=255) gacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAc > 2:4059602‑M2/17‑50 (MQ=255) gacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAc < 1:3017730‑M2/34‑1 (MQ=255) acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc < 2:3832035‑M2/35‑1 (MQ=255) acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc < 1:5104316‑M2/35‑1 (MQ=255) acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc > 1:4802434‑M2/16‑50 (MQ=255) caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc < 2:5153465‑M2/36‑1 (MQ=255) caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc > 1:921890‑M2/15‑50 (MQ=255) caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc < 2:4557646‑M2/36‑1 (MQ=255) caaaggaacaaatgCTCTTCCCACGAAGAGGCCCGCTAACCTTAGAAccc > 1:1247785‑M2/15‑50 (MQ=255) aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc > 2:4649987‑M2/14‑50 (MQ=255) aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc < 2:1341680‑M2/37‑1 (MQ=255) aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc < 2:2744215‑M2/37‑1 (MQ=255) aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc > 2:2746224‑M2/14‑50 (MQ=255) aaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccg > 2:555164‑M2/13‑50 (MQ=255) aaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccg > 1:285503‑M2/13‑50 (MQ=255) ggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc > 2:136505‑M2/11‑50 (MQ=255) ggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc < 1:3654975‑M2/40‑1 (MQ=255) cAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc < 1:1254476/50‑1 (MQ=255) gaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg > 2:327732‑M2/10‑50 (MQ=255) gaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg > 1:1414436‑M2/10‑50 (MQ=255) gaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg > 2:4722713‑M2/10‑50 (MQ=255) aacaaatgCTCTTCCCACGAAGATGGCCGCTAACCTTAGTACCCCGCCGt > 2:1799217‑M2/9‑50 (MQ=255) aacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt > 2:4647098‑M2/9‑50 (MQ=255) aaaTAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt > 2:3226789/1‑50 (MQ=255) atgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt > 1:760889‑M2/4‑50 (MQ=255) atgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt > 1:1342600‑M2/4‑50 (MQ=255) atgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt > 2:3367926‑M2/4‑50 (MQ=255) atgCTCTCCCCACGAAGAGGGCCGCTACCCTTAGTCCCCCGCCGTTAAAt < 1:924264‑M2/47‑1 (MQ=255) cccTTTCCCCACGAAGGGGGCCGCTACCTTTATTCCCCCGCCGTTAAatc < 2:3474125/50‑1 (MQ=255) gCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCa > 1:944048‑M2/2‑50 (MQ=255) ctctTCCCGCGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcat > 1:4517469/1‑50 (MQ=255) ctctTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcat > 1:565508/1‑50 (MQ=255) | GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCAT > NC_000913/3585005‑3585103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |