| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4555490 | 11 (0.100) | 136 (1.270) | 70/96 | 0.0 | 91.3% | coding (831/831 nt) | yjiC | uncharacterized protein YjiC |
| ? | NC_000913 | 4597014 = | 15 (0.140) | intergenic (+2/+136) | lgoD/opgB | L‑galactonate oxidoreductase/phosphoglycerol transferase I | |||||
Only 100 of 163 total aligned reads displayed.
GTTTAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTACCAATATAATTCCATTCACCATTTTTTAATTCAAACAGTTCTG > NC_000913/4555441‑4555539 | tttAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGT > 1:2169497‑M1/1‑49 (MQ=255) ttAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGT > 1:4419034‑M1/1‑48 (MQ=255) ttAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGT > 1:4352534‑M1/1‑48 (MQ=255) ttAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGT > 1:1877933‑M1/1‑48 (MQ=255) tAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaag > 1:631528‑M1/1‑47 (MQ=255) tAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaag > 2:1687644‑M1/1‑47 (MQ=255) tAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaag > 2:321511‑M1/1‑47 (MQ=255) tAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaa < 2:1964831‑M1/49‑3 (MQ=255) aGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaagg > 1:563458‑M1/1‑46 (MQ=255) aGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaagg > 1:4701526‑M1/1‑46 (MQ=255) aGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaag < 1:3569490‑M1/49‑4 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc < 2:520518‑M1/50‑6 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 1:5239031‑M1/1‑45 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 1:4843212‑M1/1‑45 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 2:3648724‑M1/1‑45 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc < 1:2340334‑M1/50‑6 (MQ=255) gCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaagg < 1:2125255‑M1/49‑5 (MQ=255) cTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 2:2732447‑M1/1‑44 (MQ=255) aTCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 2:1577917‑M1/1‑42 (MQ=255) tCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggc > 1:1720592‑M1/1‑41 (MQ=255) tCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTAcc > 2:1011835/1‑49 (MQ=255) tCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTAcc > 1:2898541/1‑49 (MQ=255) cTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat > 2:4079718‑M1/1‑40 (MQ=255) cTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat > 2:5069282‑M1/1‑40 (MQ=255) cTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat > 2:3001312‑M1/1‑40 (MQ=255) tGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat > 1:1733808‑M1/1‑39 (MQ=255) tGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTACCaa > 2:4959549/1‑49 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattat > 1:2450626‑M1/1‑37 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattat > 2:4226579‑M1/1‑37 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattat > 1:257791‑M1/1‑37 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagatta < 1:2539657‑M1/49‑13 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagatta < 1:3874018‑M1/49‑13 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagatt < 1:2301600‑M1/48‑12 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagatt < 1:3696810‑M1/48‑12 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat < 2:4055332‑M1/47‑11 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagat < 1:4828401‑M1/47‑11 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgaga < 1:84547‑M1/46‑10 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTACCa < 1:1696213/46‑1 (MQ=255) tataACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTACCAat < 2:1997200/48‑1 (MQ=255) taACCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattatt > 2:1582612‑M1/1‑35 (MQ=255) aCCTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaa < 2:237913‑M1/50‑18 (MQ=255) ccTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaag > 2:4688672‑M1/1‑32 (MQ=255) ccTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaag < 2:4774616‑M1/50‑19 (MQ=255) ccTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaag > 1:1112379‑M1/1‑32 (MQ=255) cTGAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagt < 2:2278299‑M1/50‑20 (MQ=255) gAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttg > 1:5062348‑M1/1‑29 (MQ=255) gAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttg > 2:1258160‑M1/1‑29 (MQ=255) gAATGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttg > 1:968334‑M1/1‑29 (MQ=255) aaTGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgc < 2:39907‑M1/50‑23 (MQ=255) aaTGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgc > 1:3281117‑M1/1‑28 (MQ=255) aaTGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagtt < 2:737387‑M1/48‑21 (MQ=255) tGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgcca < 1:4984175‑M1/50‑25 (MQ=255) tGTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgcca < 1:4076479‑M1/50‑25 (MQ=255) gTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccat > 2:2717662‑M1/1‑25 (MQ=255) gTTAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccat > 2:1157318‑M1/1‑25 (MQ=255) ttAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatg > 1:1665541‑M1/1‑24 (MQ=255) ttAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaacttgccatg > 2:4255935‑M1/1‑24 (MQ=255) tAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatg > 2:2268901‑M1/1‑23 (MQ=255) tAGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatg > 2:1966374‑M1/1‑23 (MQ=255) aGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgc < 1:560563‑M1/49‑28 (MQ=255) aGTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgc < 1:1378597‑M1/49‑28 (MQ=255) gTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgca < 2:1716679‑M1/49‑29 (MQ=255) gTACTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgca < 1:2121382‑M1/49‑29 (MQ=255) gTACTCATTCTTCCAGGTAGTaaggcgagattattaaagttgccatgcag > 1:2894328‑M1/1‑21 (MQ=255) cTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgt < 1:1211430‑M1/50‑33 (MQ=255) cTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgt < 1:3158254‑M1/50‑33 (MQ=255) cTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcg < 1:3791998‑M1/49‑32 (MQ=255) cTCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcg < 2:2239291‑M1/49‑32 (MQ=255) tCATTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgtc > 2:1229319‑M1/1‑17 (MQ=255) aTTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccg < 2:4556843‑M1/50‑36 (MQ=255) aTTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccg < 1:768894‑M1/50‑36 (MQ=255) aTTCTTCCTGGTAGTaaggcgagattattaaagttgccatgcagcgtcc < 1:4221700‑M1/49‑35 (MQ=255) ttcttcCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccgg > 1:3236348‑M1/1‑14 (MQ=255) tcttcCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccggg > 2:5379102‑M1/1‑13 (MQ=255) tcttcCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccggg > 1:100110‑M1/1‑13 (MQ=255) cttaCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccggg > 2:394484‑M1/1‑12 (MQ=255) ttcCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccgggg > 1:4897210‑M1/1‑11 (MQ=255) ttcCTGGTAGTaaggcgagattattaaagttgccatgcagcgtccgggg > 1:3642048‑M1/1‑11 (MQ=255) ttcCTGGTAGTTATTTACCAATATAATTCCATTCACCATTTTTTAATTc > 1:3427701/1‑49 (MQ=255) ttcCTGGTAGTTATTTACCAATATAATTCCATTCACCATTTTTTAATTc > 2:3353812/1‑49 (MQ=255) ccTGGTAGTaaggcgagattattaaagttgccatgcagcgtccggggaa < 1:5190275‑M1/49‑41 (MQ=255) ccTGGTAGTaaggcgagattattaaagttgccatgcagcgtccgggga < 2:4856707‑M1/48‑40 (MQ=255) cTGGTAGTaaggcgagtttattaaagttgccatgcagcgtccggggaag < 1:491899‑M1/49‑42 (MQ=255) cTGGTAGTaaggcgagattattaaagttgccatgcagcgtccggggaag < 1:3520373‑M1/49‑42 (MQ=255) cTGGTAGTTATTTACCAATATAATTCCATTCACCATTTTTTAATTCaaa < 1:1457753/49‑1 (MQ=255) tGGTAGTaaggcgagattattaaagttgccatgcagcgtccggggaagtg > 1:1237578‑M1/1‑7 (MQ=255) tGGTAGTaaggcgagattattaaagttgccatgcagcgtccggggaagtg > 1:1015051‑M1/1‑7 (MQ=255) tGGCAGTaaggcgagattattaaagttgccatgcagcgtccggggaagtg > 2:2326039‑M1/1‑7 (MQ=255) gtagtaaggcgagattattaaagttgccatgcagcgtccggggaagtgtt > 1:3645395‑M1/1‑5 (MQ=255) gtagtaaggcgagattattaaagttgccatgcagcgtccggggaagtgtt < 1:1096239‑M1/50‑46 (MQ=255) gtagtaaggcgagattattaaagttgccatgcagcgtccggggaagtgt < 2:5323247‑M1/49‑45 (MQ=255) gtagtaaggcgagattattaaagttgccatgcagcgtccggggaagtg < 1:296329‑M1/48‑44 (MQ=255) gtagtaaggcgagattattaaagttgccatgcagcgtccggggaagtg < 1:3484490‑M1/48‑44 (MQ=255) tagtaaggcgagattattaaagttgccatgcagcgtccggggaagtgttg > 1:3086782‑M1/1‑4 (MQ=255) tagtaaggcgagattattaaagttgccatgcagcgtccggggaagtgttg < 2:4315072‑M1/50‑47 (MQ=255) agtaaggcgagattattaaagttgccatgcagcgtccggggaagtgttgg > 2:1144756‑M1/1‑3 (MQ=255) gtaaggcgagattattaaagttgccatgcagcgtccggggaagtgttgg < 2:4035100‑M1/49‑48 (MQ=255) taaggcgagattattaaagttgccatgcagcgtccggggaagtgttgggc > 1:3634767‑M1/1‑1 (MQ=255) taaggcgagattattaaagttgccatgcagcgtccggggaagtgttgggc > 2:541452‑M1/1‑1 (MQ=255) taaggcgagattattaaagttgccatgcagcgtccggggaagtgttgggc < 2:2109918‑M1/50‑50 (MQ=255) | GTTTAGCTATCTGTATAACCTGAATGTTAGTACTCATTCTTCCTGGTAGTTATTTACCAATATAATTCCATTCACCATTTTTTAATTCAAACAGTTCTG > NC_000913/4555441‑4555539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |