| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 5 (0.050) | 86 (0.900) +CGAGAT |
47/86 | 0.2 | 62.3% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 114 (1.040) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
Only 100 of 203 total aligned reads displayed.
ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 | aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg < 1:649610/50‑1 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCgg < 2:4008115/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa > 1:98810/1‑50 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 2:3511562/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa > 1:589740/1‑50 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa > 1:4297853‑M2/48‑50 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa > 2:3346249‑M2/48‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc < 1:5101889‑M2/4‑1 (MQ=255) aCATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCCCCGGAc < 2:3070020/50‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg > 2:1554820‑M2/46‑50 (MQ=255) atttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACgg > 2:4472257‑M2/45‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg > 2:1710196/1‑50 (MQ=255) tACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGt > 1:3094592/1‑50 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc > 2:236205‑M2/43‑50 (MQ=255) aCAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTc > 2:1223002/1‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc > 2:1848774‑M2/42‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc < 2:3962744‑M2/8‑1 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc > 2:2804138/1‑50 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc < 2:4213361‑M2/9‑1 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc > 1:730840/1‑50 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc < 1:994162/50‑1 (MQ=255) gCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcccc < 1:4023837/50‑1 (MQ=255) gCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcccc < 2:3272539/50‑1 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt > 2:3691762/1‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt > 2:1156583‑M2/39‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 2:1987784‑M2/13‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 2:5310539/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:1293235/50‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCg < 1:5368011‑M2/14‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCg > 1:2707042‑M2/37‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCg < 1:1943334/48‑1 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCg < 1:2311070/48‑1 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:2593790‑M2/34‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 2:3681604‑M2/34‑50 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc < 2:771042/50‑1 (MQ=255) tGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCt > 2:2301538/1‑50 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc > 1:1286387‑M2/32‑49 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc > 1:2749295‑M2/32‑49 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc < 2:3170934‑M2/19‑2 (MQ=255) cgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTcgccccct < 2:2610112‑M2/20‑3 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:4860693‑M2/30‑50 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCttt > 1:2779678/1‑50 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 1:4174169/49‑1 (MQ=255) ggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTg < 2:2082997‑M2/22‑1 (MQ=255) ggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTg < 2:5103575‑M2/22‑1 (MQ=255) ggCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTg > 1:5005406/1‑50 (MQ=255) gctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTgg < 2:2000795‑M2/23‑1 (MQ=255) gctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCACCCTTgg > 1:2381684‑M2/28‑50 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg > 1:2641036/1‑50 (MQ=255) cTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:4196657/1‑50 (MQ=255) cTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 2:1248484/1‑50 (MQ=255) cTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg < 1:2352199/50‑1 (MQ=255) cTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:49730/1‑50 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:281945/1‑49 (MQ=255) gcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 2:4563526‑M2/25‑48 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTgggg < 1:3610228‑M2/25‑1 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGgag < 1:97267‑M2/27‑1 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGga < 1:3500672‑M2/26‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:2107722/1‑47 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgag < 2:1636937/50‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgag < 1:3357730/50‑1 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga > 1:4745144/1‑48 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga > 2:1107265/1‑48 (MQ=255) aagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGgaga < 2:1567863‑M2/28‑1 (MQ=255) gTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag > 2:2661534/1‑50 (MQ=255) gTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag > 1:2891479/1‑50 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag > 2:1282623‑M2/22‑50 (MQ=255) tCAAACCCAAAACCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag < 1:2007364/49‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag < 2:815966/49‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag < 1:100351/49‑1 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg < 2:1096207‑M2/30‑1 (MQ=255) ttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAggg < 1:3020577‑M2/31‑1 (MQ=255) ttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAggg < 1:3064193‑M2/31‑1 (MQ=255) cAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAggg > 2:5088993/1‑50 (MQ=255) tgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:1556243‑M2/19‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 2:4271409/1‑50 (MQ=255) aaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGtt < 1:526272/50‑1 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:1163044‑M2/17‑48 (MQ=255) cccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg < 2:2976045/50‑1 (MQ=255) agaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg > 2:4897779‑M2/16‑50 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:906632‑M2/36‑1 (MQ=255) ccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg < 1:4474058/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:1085356/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:1705353/50‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg > 2:5050160‑M2/14‑50 (MQ=255) ccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:3834020‑M2/13‑49 (MQ=255) ccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:175063‑M2/13‑49 (MQ=255) cgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 1:180016‑M2/12‑48 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 2:2457090/50‑1 (MQ=255) gttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:3204882‑M2/11‑47 (MQ=255) gttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:5342612‑M2/11‑47 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg < 2:2943016/50‑1 (MQ=255) tGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAggg > 2:939084/1‑49 (MQ=255) gCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgggg > 1:4782467/1‑49 (MQ=255) gCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgggg > 2:259061/1‑49 (MQ=255) gCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgggg > 2:3460978/1‑49 (MQ=255) cACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGa > 1:3737724/1‑49 (MQ=255) cGGACGGCCCCCTCGCCCTTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAc < 2:446532/50‑1 (MQ=17) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 1:2318047/1‑50 (MQ=255) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 2:542920/1‑50 (MQ=255) | ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |