| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 7 (0.060) | 130 (1.210) | 66/96 | 0.0 | 93.6% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 11 (0.100) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
Only 100 of 146 total aligned reads displayed.
GGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAA > NC_000913/1873418‑1873516 | ggccgcaatcgaactttatctggttttctcgtttcactaaccgaaggaga < 1:351648‑M2/1‑1 (MQ=255) gccgcaatcgaactttatctggttttctcgtttcactaaccgaaggagAt < 2:1239835‑M2/2‑1 (MQ=255) gccgcaatcgaactttatctggttttctcgtttcactaaccgaaggagAt > 2:1477280‑M2/49‑50 (MQ=255) gccgcaatcgaactttatctggttttctcgtttcactaaccgaaggagAt < 2:1522269‑M2/2‑1 (MQ=255) ccgcaatcgaactttatctggttttctcgtttcactaaccgaaggagATg < 1:3705171‑M2/3‑1 (MQ=255) cgcaatcgaactttatctggttttctcgtttcactaaccgaaggagATGc > 2:1904006‑M2/47‑50 (MQ=255) cgcaatcgaactttatctggttttctcgtttcactaaccgaaggagATGc > 2:4127714‑M2/47‑50 (MQ=255) gcaatcgaactttatctggttttctcgtttcactaaccgaaggagATGCg > 1:5191626‑M2/46‑50 (MQ=255) caatcgaactttatctggttttctcgtttcactaaccgaaggagATGCg > 2:2791819‑M2/45‑49 (MQ=255) caatcgaactttatctggttttctcgtttcactaaccgaaggagATGCGt < 2:2624538‑M2/6‑1 (MQ=255) aatcgaactttatctggttttctcgtttcactaaccgaaggagATGCGta > 2:5139210‑M2/44‑50 (MQ=255) atcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtat < 2:4784129‑M2/8‑1 (MQ=255) ttCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGtat > 2:3767130/1‑49 (MQ=255) tcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata < 1:2457488‑M2/9‑1 (MQ=255) tcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata < 2:1368789‑M2/9‑1 (MQ=255) tcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata < 2:5333269‑M2/9‑1 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:4195391‑M2/40‑48 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaaa < 2:1033841‑M2/11‑1 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaa < 1:2099963‑M2/10‑1 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaa < 1:5138694‑M2/10‑1 (MQ=255) aactttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAg > 2:2739632‑M2/39‑50 (MQ=255) aactttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAg > 2:1176605‑M2/39‑50 (MQ=255) actttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGc < 1:2713670‑M2/13‑1 (MQ=255) actttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGc > 1:4506907‑M2/38‑50 (MQ=255) actttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGc > 2:2305001‑M2/38‑50 (MQ=255) gTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCt < 2:1860757/50‑1 (MQ=255) ctttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCt > 1:1020010‑M2/37‑50 (MQ=255) tttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCtt > 1:5246617‑M2/36‑50 (MQ=255) atctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc > 1:755849‑M2/33‑49 (MQ=255) atctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc < 2:2574535‑M2/17‑1 (MQ=255) atctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc < 2:3103481‑M2/17‑1 (MQ=255) atctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc > 2:5100345‑M2/33‑49 (MQ=255) ctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGAt > 1:2465705‑M2/31‑50 (MQ=255) gcgATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGa < 2:3537185/50‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGAt < 2:1047795‑M2/20‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATg < 1:379160‑M2/21‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATg < 1:556486‑M2/21‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGa < 1:290836‑M2/22‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGa < 2:844132‑M2/22‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg < 2:2152570‑M2/23‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg < 1:2271292‑M2/23‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg > 2:2733836‑M2/28‑50 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg < 2:772592‑M2/23‑1 (MQ=255) gttttctcggttcactaaccgaaggagAGGCGTATAAAGCTTCCGAt < 2:3446154‑M2/20‑1 (MQ=255) tttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCg > 1:2279230‑M2/26‑50 (MQ=255) ttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGt > 2:3050535‑M2/25‑50 (MQ=255) tctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGtt > 1:3556395‑M2/24‑50 (MQ=255) tctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGt < 2:2432526‑M2/26‑1 (MQ=255) tctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGt < 1:591573‑M2/26‑1 (MQ=255) tctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGt < 1:1018222‑M2/26‑1 (MQ=255) ctcgtttcgctaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGtt < 1:4535846‑M2/27‑1 (MQ=255) cgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTta > 1:4302536‑M2/21‑49 (MQ=255) cgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTta > 1:519118‑M2/21‑49 (MQ=255) cgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTta > 1:1498694‑M2/21‑49 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGttt < 2:5161371‑M2/28‑1 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTtata > 1:465911‑M2/20‑50 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 1:1285244‑M2/19‑50 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 1:368282‑M2/19‑50 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 1:4163482‑M2/19‑50 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat < 1:5133837‑M2/32‑1 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 2:4758480‑M2/19‑50 (MQ=255) tcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATg < 2:3694337‑M2/33‑1 (MQ=255) cactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGt > 1:3020313‑M2/16‑49 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTc < 1:2724804‑M2/35‑1 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTc < 1:1378682‑M2/35‑1 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTc > 1:4616237‑M2/15‑49 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCa < 2:5115757‑M2/36‑1 (MQ=255) taaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCaa > 2:201384‑M2/13‑49 (MQ=255) taaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCaa > 1:2209909‑M2/13‑49 (MQ=255) taaccgaaggagATGCGTATAAAGCTACCGATGAGCGTTTATATGTCaa > 1:2961264‑M2/13‑49 (MQ=255) tACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATa < 2:5283087/50‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATaa < 1:4492430‑M2/40‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATaa < 2:4515972‑M2/40‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATaa < 1:21471‑M2/40‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATaa < 1:811573‑M2/40‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATaa < 1:1928062‑M2/40‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATa < 1:4577697‑M2/39‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATa < 2:3973334‑M2/39‑1 (MQ=255) cGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:4096229/1‑50 (MQ=255) cGTTACATGATGCGTATAAAGCATCCGATGAGCGTTTATATGTCAATaa < 2:1892154/49‑1 (MQ=255) cgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGc < 2:192808‑M2/42‑1 (MQ=255) cgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGc < 1:5038961‑M2/42‑1 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 2:3297929‑M2/7‑47 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 2:1303409‑M2/7‑47 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg < 2:3300071‑M2/44‑1 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg < 1:4300027‑M2/44‑1 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg < 1:4967844‑M2/44‑1 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg > 2:1449236‑M2/6‑49 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg > 1:2045433‑M2/6‑49 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg > 2:3955592‑M2/6‑49 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGa < 1:173516‑M2/45‑1 (MQ=255) aCATGATGCGTATAAAGCTTCCGATGAGCGTTTACATGTCAATAAGCAg > 2:403513/1‑49 (MQ=255) ggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGaa > 2:1453862‑M2/5‑50 (MQ=255) gagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGaa > 1:4694826‑M2/4‑49 (MQ=255) gagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGaa > 1:5263782‑M2/4‑49 (MQ=255) gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACa > 2:1659966‑M2/2‑49 (MQ=255) gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACa > 2:1369390‑M2/2‑49 (MQ=255) gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACa > 1:419281‑M2/2‑49 (MQ=255) atgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACaaa < 1:1032002/50‑1 (MQ=255) atgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACaaa < 1:3109572/50‑1 (MQ=255) | GGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAA > NC_000913/1873418‑1873516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |