| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 78 (0.590) +CGAGAT |
42/86 | 0.3 | 60.2% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 118 (0.780) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAG > NC_000913/4070444‑4070482 |||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:706154/1‑50AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC < 1:5250786/50‑1AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:3469632/1‑50AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:1460317/1‑50 AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACG < 2:1608924/50‑1 AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 2:5382285/1‑49 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGA < 2:2909953/50‑1 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 2:3436132/1‑48 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 2:3871857/50‑1 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 2:864646/50‑1 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:5725260/1‑47 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGA < 2:3853931/50‑1 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 2:5175442/1‑46 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 2:4856077/1‑46 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 2:5765028/1‑46 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT > 2:2159446/1‑50 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 2:5101283/1‑49 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:1649240/1‑49 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 2:3488357/1‑49 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA < 1:4696571/50‑1 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:4279058/1‑50 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGG < 1:7930/49‑1 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC > 1:4213489/1‑50 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC < 2:2105441/50‑1 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC > 1:3440406/1‑50 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC < 1:3368273/50‑1 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC > 2:798032/1‑50 AATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACG > 1:727744/1‑50 AATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACG < 1:5457316/50‑1 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT > 2:4984849/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT > 1:5088866/1‑50 TTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC > 2:2233782/1‑50 TTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC > 2:50839/1‑50 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC > 2:922220/1‑50 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC < 1:5181201/49‑1 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC > 1:1410624/1‑50 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC < 2:3123088/49‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC < 2:2488444/50‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 2:293878/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC < 2:3075594/50‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 2:3198460/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 1:3369990/1‑50 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 2:1431993/1‑50 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT < 1:2918618/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC > 1:2203825/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:1387192/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 2:5507195/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC > 2:2435493/1‑50 GTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCG > 2:3120854/1‑50 TCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGC < 2:1547384/50‑1 CAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCC > 2:5554725/1‑50 CAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCC > 2:2426562/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 2:1304846/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCC < 1:483978/49‑1 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCC < 1:273325/49‑1 GACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCC < 1:316077/50‑1 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc < 2:4536817/50‑2 CGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCct > 2:3282816/1‑48 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT > 1:3807565/1‑50 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:5734429/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT > 1:3179133/1‑50 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:1109976/50‑1 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG > 2:1459628/1‑50 GCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGG > 2:1416370/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:4539803/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 2:1072216/1‑50 GCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 2:5496144/1‑48 GCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:4416053/1‑48 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGG < 1:743489/48‑1 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 2:4690231/1‑47 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:2745641/1‑47 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:4733763/1‑48 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG < 2:1072501/50‑1 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGG < 1:2314067/50‑1 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGG < 2:443662/50‑1 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGG > 2:2872993/1‑50 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGG < 2:4756310/50‑1 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:1411786/1‑50 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTT < 2:5203458/49‑1 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 2:1234841/1‑48 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 2:3509031/1‑48 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG < 1:1419013/50‑1 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG < 1:5765111/50‑1 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG > 1:5338499/1‑50 CCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 2:893577/50‑2 CCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:5841805/50‑2 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGtg < 2:343967/50‑3 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 2:487512/1‑48 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 2:4387948/1‑48 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 2:1678946/1‑48 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1066655/1‑48 GTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1096566/1‑47 GTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 2:4205453/1‑47 GTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:3669654/1‑47 |||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAG > NC_000913/4070444‑4070482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |