| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 78 (0.590) +CGAGAT |
42/86 | 0.3 | 60.2% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 118 (0.780) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
Only 100 of 196 total aligned reads displayed.
ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAC > NC_000913/4070395‑4070492 | aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg > 2:1041192/1‑50 (MQ=255)aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg > 2:600636/1‑50 (MQ=255)aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg < 1:3358627/50‑1 (MQ=255) cagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg > 2:5101283‑M2/49‑49 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCgg < 2:5787229/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa > 1:1297724/1‑50 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa > 2:2086187/1‑50 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa < 1:4696571‑M2/3‑1 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc > 1:3440406‑M2/47‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc > 1:4213489‑M2/47‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc > 2:798032‑M2/47‑50 (MQ=255) aCATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCggtc < 2:4528535/50‑3 (MQ=255) aCATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGAc < 1:2794453/50‑1 (MQ=255) cATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACg < 1:2360665/50‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg < 1:5457316‑M2/5‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg > 1:727744‑M2/46‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg > 1:2282012/1‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGt > 2:4984849‑M2/44‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGt > 1:5088866‑M2/44‑50 (MQ=255) tACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGGACCGGACGGt > 2:1845274/1‑50 (MQ=255) tACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGt < 1:4782201/50‑1 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc > 2:2233782‑M2/43‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc > 2:922220‑M2/42‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc < 1:5181201‑M2/8‑1 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc > 2:244629/1‑50 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc > 1:2915570/1‑50 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc < 2:3123088‑M2/9‑1 (MQ=255) gCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcccc > 2:4559799/1‑50 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcccc < 2:3075594‑M2/11‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcccc > 1:3369990‑M2/40‑50 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt > 1:3750854/1‑50 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt < 1:4692854/50‑1 (MQ=255) ccTCCCGTGAGGCTGATGACAAACCCAAAAACTGCACCGGACGGTCCCCt > 2:4004011/1‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:1387192‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 2:5507195‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc > 1:2203825‑M2/38‑50 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:3594264/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:641095/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:4963352/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc > 2:3159552/1‑50 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc > 1:4315871/1‑50 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGc < 2:1547384‑M2/15‑1 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCTGACGGTCCCCTCg < 2:4576186/48‑1 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc > 2:2990471/1‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc < 1:3558264/50‑1 (MQ=255) cagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcc > 2:2426562‑M2/35‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 2:1304846‑M2/34‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcccc < 1:316077‑M2/18‑1 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc > 2:3190005/1‑50 (MQ=255) cgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTcgccccct > 2:3282816‑M2/31‑48 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt < 1:5734429‑M2/21‑1 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:3807565‑M2/30‑50 (MQ=255) aGGCTGATGTCAAACACAAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 1:1117931/49‑1 (MQ=255) gctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTgg > 2:1416370‑M2/28‑50 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCACGCCCCTTTggg > 1:1469182/1‑49 (MQ=255) gcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:4416053‑M2/25‑48 (MQ=255) aTGTCAAACCCAAAAACTGCTCCGGACGGTCCCCTCGCCCCTTTGGGgag < 2:3486940/50‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgag < 1:1867989/50‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgag < 2:5526767/50‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga < 1:4588490/49‑1 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgaga < 1:2741259/50‑1 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga > 2:1438074/1‑48 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag < 2:1072501‑M2/29‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 2:3403376/50‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 1:4019592/50‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 2:5419907/1‑50 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 2:5236909/1‑50 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg > 2:2872993‑M2/21‑50 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg < 2:4756310‑M2/30‑1 (MQ=255) ttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAggg > 1:1411786‑M2/20‑50 (MQ=255) cAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAggg > 1:5839500/1‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 2:4880676/1‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt < 1:1142336/50‑1 (MQ=255) aaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGtt < 1:91652/50‑1 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 2:3509031‑M2/17‑48 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTa < 2:1765102/50‑1 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTa < 1:1799953/50‑1 (MQ=255) cccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGAAGAGGGTTAg < 1:74794/50‑1 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:5765111‑M2/36‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 2:407162/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 2:4412235/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 2:4861838/50‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg > 1:5338499‑M2/14‑50 (MQ=255) ccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt < 2:893577‑M2/38‑2 (MQ=255) cgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:4387948‑M2/12‑48 (MQ=255) cgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:1678946‑M2/12‑48 (MQ=255) cgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 1:1066655‑M2/12‑48 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:3233850/1‑47 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 2:3225180/50‑1 (MQ=255) gttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 1:1096566‑M2/11‑47 (MQ=255) gttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 2:4205453‑M2/11‑47 (MQ=255) aaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgaga < 1:2007120/50‑1 (MQ=255) aaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGagag > 2:3678267/1‑50 (MQ=255) aaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGagag < 1:369525/50‑1 (MQ=255) cACCGGTCGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGa > 2:5495063/1‑49 (MQ=255) aCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaaa < 2:4236907/50‑1 (MQ=255) aCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaaa < 2:4148573/50‑1 (MQ=255) aCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaa > 1:1597373/1‑49 (MQ=255) aCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaa > 2:392298/1‑49 (MQ=255) cGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAc > 2:2626116/1‑50 (MQ=255) | ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAC > NC_000913/4070395‑4070492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |