| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 139 [0] | [0] 143 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 137 (0.900) | 74/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 137 total aligned reads displayed.
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:2338165/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 2:3848830/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:4028507/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:4286788/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 2:1701148/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 2:4778471/1‑49 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 2:2644077/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:5744191/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 2:5748329/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:2471127/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:4366813/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 2:2524354/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATA‑TTTTAATCTTGAATAT < 1:5647494/49‑1 GAAACAGCAATAATTTTATATTAACTGAAAATATTTTTAATCTTGAATAT > 1:945163/1‑50 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:3166845/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:4829830/1‑49 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:304124/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 2:4570882/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 2:4784422/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 2:733917/50‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:4500075/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:959645/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 2:5115829/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 2:2699486/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 2:1469381/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:4094472/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 2:1950301/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:650122/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:905458/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:3431569/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:1142717/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 2:5470068/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 2:3915689/50‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 2:4118046/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 2:1588138/50‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 2:1090338/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 2:1960521/1‑50 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 2:5706654/1‑49 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:818723/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:314142/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 2:156812/49‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:1094916/50‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 2:3288385/1‑50 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 2:1503484/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:4378758/49‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 2:3575184/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:1926542/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 2:174734/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:798097/50‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 2:3005312/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 2:4417852/49‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 2:1060043/1‑49 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 2:5291850/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 2:4154020/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 2:4073221/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:1688591/49‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 2:5681881/1‑49 CACTGAAAATCTTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 2:3915368/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 2:4536387/49‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 2:2513613/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:1314898/1‑50 GAAAATCTTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 2:2460469/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:3529412/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 2:3727582/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 2:4060844/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 2:4378003/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 2:319535/49‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:2811487/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:1093649/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:1687740/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 2:156318/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 2:4794352/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 2:2991363/1‑50 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 2:2756264/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 2:2668274/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 2:1746792/1‑50 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:5801869/50‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:4622170/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 2:2547214/1‑50 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 2:4945144/1‑50 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 2:5545136/1‑50 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 1:599650/1‑50 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:1492873/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:1418304/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 2:3538796/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:2835091/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 2:3112554/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:4130364/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:5089787/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 2:699872/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 2:3674655/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG < 2:1902687/50‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 2:2271757/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:5737344/49‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:2868207/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 2:2774716/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:5371794/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 2:2896330/1‑49 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:9356/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 2:3557532/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |